Pre_GI: BLASTP Hits

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Query: NC_006361:5546232:5555078 Nocardia farcinica IFM 10152, complete genome

Start: 5555078, End: 5556352, Length: 1275

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004369:1051013:1060725106072510619781254Corynebacterium efficiens YS-314, complete genomeputative ABC transporter substrate-binding protein6e-146517
NC_009437:2579161:2621677262167726229241248Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeextracellular ligand-binding receptor1e-121436
NC_004113:1137754:1151497115149711528101314Thermosynechococcus elongatus BP-1, complete genomeABC transporter substrate-binding protein8e-112404
NC_010475:420978:4209784209784222941317Synechococcus sp. PCC 7002, complete genomeABC transporter, branched-chain amino acid transport, periplasmic binding protein1e-105383
NC_015681:1201926:1211035121103512123031269Thermodesulfatator indicus DSM 15286 chromosome, complete genomeurea ABC transporter, urea binding protein5e-103375
NC_013894:672840:6870666870666882801215Thermocrinis albus DSM 14484 chromosome, complete genomeurea ABC transporter, urea binding protein6e-98357
NC_005070:334952:3673363673363686161281Synechococcus sp. WH 8102, complete genomeputative urea binding protein4e-92338
NC_015224:1641819:1660245166024516615131269Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative substrate-binding periplasmic transport protein1e-91337
NC_008800:3123495:3125172312517231264401269Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative substrate-binding periplasmic transport protein2e-91336
NC_008781:1038158:1049613104961310508961284Polaromonas naphthalenivorans CJ2, complete genometwin-arginine translocation pathway signal1e-88327
NC_008343:2050000:2066710206671020679931284Granulibacter bethesdensis CGDNIH1, complete genomeamide-urea binding protein5e-88325
NC_010995:1101614:1123276112327611244721197Cellvibrio japonicus Ueda107, complete genomeamide-urea binding protein1e-86320
NC_007516:2420264:2432101243210124333991299Synechococcus sp. CC9605, complete genomeputative urea ABC transporter, substrate binding protein1e-86320
NC_010084:2674972:2696485269648526977921308Burkholderia multivorans ATCC 17616 chromosome 1, completeurea ABC transporter urea binding protein6e-86318
NC_013422:1732677:1738955173895517401991245Halothiobacillus neapolitanus c2, complete genomeurea ABC transporter, urea binding protein1e-85317
NC_007952:1453000:1477605147760514788701266Burkholderia xenovorans LB400 chromosome 2, complete sequenceABC branched chain amino acid family transporter, periplasmic ligand binding protein6e-85314
NC_016825:158626:1663751663751675411167Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12twin-arginine translocation pathway signal7e-85314
NC_009074:2970435:3008433300843330097401308Burkholderia pseudomallei 668 chromosome I, complete sequenceputative amino acid ABC transporter, periplasmic amino acid-binding protein2e-84313
NC_013209:160892:1764661764661778031338Acetobacter pasteurianus IFO 3283-01, complete genomeamide-urea transporter substrate-binding periplasmic protein2e-83310
NC_017100:160892:1764661764661778031338Acetobacter pasteurianus IFO 3283-03, complete genomeamide-urea transporter substrate-binding periplasmic protein2e-83310
NC_017108:160892:1764661764661778031338Acetobacter pasteurianus IFO 3283-12, complete genomeamide-urea transporter substrate-binding periplasmic protein2e-83310
NC_017111:160892:1764661764661778031338Acetobacter pasteurianus IFO 3283-32, complete genomeamide-urea transporter substrate-binding periplasmic protein2e-83310
NC_017121:160892:1764661764661778031338Acetobacter pasteurianus IFO 3283-07, complete genomeamide-urea transporter substrate-binding periplasmic protein2e-83310
NC_017125:160892:1764661764661778031338Acetobacter pasteurianus IFO 3283-22, complete genomeamide-urea transporter substrate-binding periplasmic protein2e-83310
NC_017146:160892:1764661764661778031338Acetobacter pasteurianus IFO 3283-26, complete genomeamide-urea transporter substrate-binding periplasmic protein2e-83310
NC_017150:160892:1764661764661778031338Acetobacter pasteurianus IFO 3283-01-42C, complete genomeamide-urea transporter substrate-binding periplasmic protein2e-83310
NC_003911:1791878:1827788182778818291221335Silicibacter pomeroyi DSS-3, complete genomebranched-chain amino acid ABC transporter, periplasmic substrate-binding protein2e-78293
NC_017506:2993679:3017402301740230186911290Marinobacter adhaerens HP15 chromosome, complete genomeurea short-chain amide or branched-chain amino acid uptake ABC transporter periplasmic solute-binding protein5e-76285
NC_018691:761560:7768057768057781031299Alcanivorax dieselolei B5 chromosome, complete genomeBranched-chain amino acid ABC transporter, putative3e-74279
NC_012997:4621764:4640752464075246420501299Teredinibacter turnerae T7901, complete genomeurea ABC transporter, urea binding protein4e-71268
NC_020908:5047410:5051128505112850523781251Octadecabacter arcticus 238, complete genomeputative aliphatic amidase expression-regulating protein7e-68258
NC_014828:2497462:2514413251441325156571245Ethanoligenens harbinense YUAN-3 chromosome, complete genomeABC transporter, periplasmic solute-binding protein, putative1e-65251
NC_015138:4205986:4205986420598642071311146Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeextracellular ligand-binding receptor1e-63244
NC_020908:5047410:5058198505819850593521155Octadecabacter arcticus 238, complete genomealiphatic amidase expression-regulating protein1e-62240
NC_015563:3571682:3577189357718935783371149Delftia sp. Cs1-4 chromosome, complete genomeextracellular ligand-binding receptor3e-62239
NC_010002:3980832:3996174399617439973221149Delftia acidovorans SPH-1, complete genomeABC branched chain amino acid family transporter, periplasmic ligand binding protein8e-62238
NC_014828:2497462:2506564250656425077631200Ethanoligenens harbinense YUAN-3 chromosome, complete genomeExtracellular ligand-binding receptor2e-61236
NC_010505:4676403:4696869469686946980231155Methylobacterium radiotolerans JCM 2831, complete genomeputative amidase expression-regulating protein4e-59229
NC_011757:1553500:1560502156050215618121311Methylobacterium chloromethanicum CM4, complete genomeputative substrate-binding component of ABC transporter6e-59228
NC_012988:1817000:1824043182404318253291287Methylobacterium extorquens DM4, complete genomealiphatic amidase expression-regulating protein , amiC6e-59228
NC_012988:4292815:4327289432728943283681080Methylobacterium extorquens DM4, complete genomealiphatic amidase expression-regulating protein, AmiC1e-53210
NC_015556:4025559:4039913403991340410371125Pseudomonas fulva 12-X chromosome, complete genomeABC-type branched-chain amino acid transport systems periplasmic component-like protein2e-53210
NC_011770:1811874:1827106182710618282631158Pseudomonas aeruginosa LESB58, complete genomealiphatic amidase expression-regulating protein1e-46187
NC_008463:1756434:1770873177087317720301158Pseudomonas aeruginosa UCBPP-PA14, complete genomealiphatic amidase expression-regulating protein1e-45184
NC_015556:4025559:4033832403383240350701239Pseudomonas fulva 12-X chromosome, complete genomebranched chain amino-acid ABC transporter substrate-binding protein2e-44180
NC_012880:913698:9164499164499176931245Dickeya dadantii Ech703, complete genomeExtracellular ligand-binding receptor3e-44179
NC_020453:3179346:3179346317934631805841239Agromonas oligotrophica S58 DNA, complete genomealiphatic amidase expression-regulating protein8e-44178
NC_015723:1448000:1454414145441414555351122Cupriavidus necator N-1 chromosome 2, complete sequencehypothetical protein3e-43176
NC_008212:2978786:2994180299418029954721293Haloquadratum walsbyi DSM 16790, complete genomeABC-type urea transport systems,substrate-binding protein9e-39161
NC_010505:4676403:4699711469971147008651155Methylobacterium radiotolerans JCM 2831, complete genomeExtracellular ligand-binding receptor5e-38159
NC_015312:6357469:6360162636016263612321071Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeregulatory protein8e-38158
NC_012988:4292815:4316974431697443181311158Methylobacterium extorquens DM4, complete genomeextracellular ligand-binding receptor8e-35148
NC_010515:1205258:1216482121648212176601179Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceABC branched chain amino acid family transporter, periplasmic ligand binding protein5e-28125
NC_011001:302500:3173093173093184871179Burkholderia cenocepacia J2315 chromosome 2, complete sequencehypothetical protein3e-27122
NC_009720:464078:4676714676714690081338Xanthobacter autotrophicus Py2, complete genomeextracellular ligand-binding receptor6e-22105
NC_008576:3331825:3339175333917533425313357Magnetococcus sp. MC-1, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)6e-21102
NC_014540:1835493:1839220183922018404281209Burkholderia sp. CCGE1003 chromosome 2, complete sequenceextracellular ligand-binding receptor9e-2098.6
NC_014974:1076565:1094174109417410953641191Thermus scotoductus SA-01 chromosome, complete genomeextracellular ligand-binding receptor1e-1998.2
NC_010170:4739925:4743625474362547448961272Bordetella petrii, complete genomeABC transporter substrate-binding protein3e-1893.2
NC_016906:839406:8444918444918458761386Gordonia polyisoprenivorans VH2 chromosome, complete genomehypothetical protein3e-1790.1
NC_017059:2084500:2097334209733420988571524Rhodospirillum photometricum DSM 122, complete genomeTwin-arginine translocation pathway signal2e-1584
NC_010511:637214:6536716536716549121242Methylobacterium sp. 4-46 chromosome, complete genomeextracellular ligand-binding receptor8e-1582
NC_009617:3184924:3218440321844032196211182Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeextracellular ligand-binding receptor1e-1481.6
NC_011661:961129:9625519625519636811131Dictyoglomus turgidum DSM 6724, complete genomeExtracellular ligand-binding receptor9e-1581.6
NC_011979:3045952:3068002306800230691411140Geobacter sp. FRC-32, complete genomeExtracellular ligand-binding receptor1e-1481.3
NC_008786:5128363:5138340513834051394941155Verminephrobacter eiseniae EF01-2, complete genomeExtracellular ligand-binding receptor2e-1480.9
NC_011297:787932:7916897916897928191131Dictyoglomus thermophilum H-6-12, complete genomebranched chain amino acid ABC transporter3e-1480.1
NC_012587:3613162:3635526363552636367191194Rhizobium sp. NGR234, complete genomeputative extracellular ligand-binding receptor5e-1479.3
NC_009937:5033152:5040446504044650416151170Azorhizobium caulinodans ORS 571, complete genomeputative substrate-binding protein8e-1478.6
NC_015387:2072237:2073114207311420742381125Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeExtracellular ligand-binding receptor2e-1377.4
NC_007953:504939:5136815136815149311251Burkholderia xenovorans LB400 chromosome 3, complete sequenceABC branched chain amino acid family transporter, periplasmic ligand binding protein2e-1377
NC_010557:679656:6890646890646901731110Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceExtracellular ligand-binding receptor4e-1376.3
NC_011146:2200142:2235574223557422367671194Geobacter bemidjiensis Bem, complete genomeExtracellular ligand-binding receptor5e-1375.9
NC_008786:1507139:1526660152666015278381179Verminephrobacter eiseniae EF01-2, complete genomeExtracellular ligand-binding receptor2e-1273.9
NC_015727:1294532:1319872131987213210951224Cupriavidus necator N-1 plasmid BB1p, complete sequenceABC transporter substrate-binding protein3e-1273.6
NC_016885:1153277:1177898117789811791841287Pyrobaculum oguniense TE7 chromosome, complete genomebranched-chain amino acid ABC transporter periplasmic protein4e-1272.8
NC_014831:2133060:2141827214182721430561230Thermaerobacter marianensis DSM 12885 chromosome, complete genomeamino acid/amide ABC transporter substrate-binding protein, HAAT family1e-1171.2
NC_020210:2044944:2053712205371220549561245Geobacillus sp. GHH01, complete genomeputative leucine ABC transporter substrate-binding protein2e-1170.9
NC_013947:4413382:4423401442340144246001200Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeExtracellular ligand-binding receptor2e-1170.9
NC_012658:545840:5468995468995480411143Clostridium botulinum Ba4 str. 657 chromosome, complete genomeputative high-affinity branched-chain amino acid ABC transporter amino acid-binding protein5e-1169.3
NC_010170:1219641:1241603124160312428051203Bordetella petrii, complete genomeputative Substrate-binding periplasmic protein6e-1169.3
NC_020291:6426704:6442797644279764439511155Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeamino acid/amide ABC transporter substrate-binding protein, HAAT family6e-1168.9
NC_003454:2080705:2100519210051921016701152Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeLeucine-, isoleucine-, valine-, threonine-, and alanine-binding protein9e-1168.6
NC_014391:4644500:4645341464534146466811341Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeextracellular ligand-binding receptor8e-1168.6
NC_009483:2489000:2489003248900324901421140Geobacter uraniireducens Rf4 chromosome, complete genomeextracellular ligand-binding receptor1e-1068.2
NC_014355:220002:2318072318072330091203Candidatus Nitrospira defluvii, complete genomeputative ABC transporter Leu/Ile/Val-binding protein1e-1067.8
NC_010511:6169468:6190516619051661917511236Methylobacterium sp. 4-46 chromosome, complete genomeextracellular ligand-binding receptor2e-1067.4
NC_011892:306437:3064373064373076721236Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completeExtracellular ligand-binding receptor2e-1067.4
NC_011768:79297:9265092650938341185Desulfatibacillum alkenivorans AK-01, complete genomeExtracellular ligand-binding receptor3e-1067
NC_016585:1004000:1019348101934810205441197Azospirillum lipoferum 4B plasmid AZO_p1, complete sequencebranched chain amino acid ABC transporter substrate-binding protein3e-1067
NC_008786:4216152:4233994423399442352261233Verminephrobacter eiseniae EF01-2, complete genomeExtracellular ligand-binding receptor3e-1067
NC_010337:98974:1023691023691035711203Heliobacterium modesticaldum Ice1, complete genomebranched chain amino acid abc transporter, amino acid-binding protein3e-1066.6
NC_013939:913890:9285399285399296781140Deferribacter desulfuricans SSM1, complete genomebranched-chain amino acid ABC transporter substrate-binding protein5e-1065.9
NC_008699:2294361:2297087229708722982591173Nocardioides sp. JS614, complete genomeExtracellular ligand-binding receptor7e-1065.5
NC_010645:278906:2980692980692992951227Bordetella avium 197N, complete genomebranched-chain amino acid binding protein9e-1065.1
NC_016147:3023180:3043998304399830451161119Pseudoxanthomonas spadix BD-a59 chromosome, complete genometwin-arginine translocation pathway signal1e-0965.1
NC_008543:323773:3252703252703264301161Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceExtracellular ligand-binding receptor1e-0965.1
NC_011979:3045952:3066827306682730679661140Geobacter sp. FRC-32, complete genomeExtracellular ligand-binding receptor2e-0964.3
NC_008751:2774000:2794966279496627960841119Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeExtracellular ligand-binding receptor2e-0963.9
NC_002937:614000:6169966169966181141119Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completehigh-affinity branched chain amino acid ABC transporter, periplasmic branched chain amino acid-binding protein2e-0963.9
NC_013740:15401:1741117411185891179Acidaminococcus fermentans DSM 20731, complete genomeExtracellular ligand-binding receptor3e-0963.5
NC_015711:3085038:3107479310747931086571179Myxococcus fulvus HW-1 chromosome, complete genomeputative branched chain amino acid ABC transporter periplasmic amino acid-binding protein6e-0962.4
NC_008702:4064470:4086174408617440872891116Azoarcus sp. BH72, complete genomeprobable leucine-specific binding protein7e-0962
NC_015318:1583839:1594624159462415957661143Hippea maritima DSM 10411 chromosome, complete genomeExtracellular ligand-binding receptor8e-0962
NC_004463:60225:7247072470747342265Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein1e-0861.6
NC_018750:6869675:6872039687203968733041266Streptomyces venezuelae ATCC 10712, complete genomelipoprotein1e-0861.2
NC_016002:2652500:2665852266585226670001149Pseudogulbenkiania sp. NH8B, complete genomeextracellular ligand-binding receptor2e-0860.8
NC_010552:335989:3383023383023394531152Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceExtracellular ligand-binding receptor2e-0860.5
NC_009633:2137999:2158402215840221596101209Alkaliphilus metalliredigens QYMF chromosome, complete genomeextracellular ligand-binding receptor3e-0860.1
NC_016633:1898234:1899184189918419003501167Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomebranched-chain amino acid ABC transporter periplasmic protein3e-0860.1
NC_011666:2259447:2259447225944722605651119Methylocella silvestris BL2, complete genomeExtracellular ligand-binding receptor4e-0859.7
NC_007948:3502843:3516731351673135180021272Polaromonas sp. JS666, complete genomeTwin-arginine translocation pathway signal6e-0859.3
NC_016147:2820232:2831471283147128326521182Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeextracellular ligand-binding receptor7e-0858.9
NC_011894:4013830:4036876403687640380931218Methylobacterium nodulans ORS 2060, complete genomeExtracellular ligand-binding receptor1e-0758.5
NC_006396:320853:3254713254713268411371Haloarcula marismortui ATCC 43049 chromosome I, complete sequenceleucine-binding protein1e-0758.2
NC_015556:819503:8310258310258321461122Pseudomonas fulva 12-X chromosome, complete genomeExtracellular ligand-binding receptor1e-0758.2
NC_014837:1144500:1169762116976211709401179Pantoea sp. At-9b chromosome, complete genomeextracellular ligand-binding receptor1e-0758.2
NC_013592:3263005:3282449328244932835761128Dickeya dadantii Ech586, complete genomeExtracellular ligand-binding receptor2e-0757.8
NC_007503:2010858:2024141202414120253251185Carboxydothermus hydrogenoformans Z-2901, complete genomehigh affinity branched-chain amino acid ABC transporter, amino acid-binding protein1e-0757.8
NC_014641:20103:4203442034432091176Achromobacter xylosoxidans A8 plasmid pA81, complete sequenceextracellular ligand-binding receptor 62e-0757.4
NC_018691:896464:8964648964648976121149Alcanivorax dieselolei B5 chromosome, complete genomeABC-type branched-chain amino acid transport system, periplasmic component2e-0757.4
NC_009437:2579161:2601627260162726028081182Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeextracellular ligand-binding receptor2e-0757.4
NC_010424:697187:7002417002417014191179Candidatus Desulforudis audaxviator MP104C, complete genomeExtracellular ligand-binding receptor3e-0757
NC_009436:2685910:2687061268706126881821122Enterobacter sp. 638, complete genomeextracellular ligand-binding receptor3e-0756.6
NC_015458:3077804:3097937309793730991391203Pusillimonas sp. T7-7 chromosome, complete genomeextracellular ligand-binding receptor4e-0756.6
NC_010515:2358134:2372033237203323731511119Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceExtracellular ligand-binding receptor5e-0756.2
NC_008543:2035292:2037685203768520388031119Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceExtracellular ligand-binding receptor5e-0756.2
NC_008061:428501:4408634408634419811119Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceExtracellular ligand-binding receptor5e-0756.2
NC_008554:4839116:4848442484844248494611020Syntrophobacter fumaroxidans MPOB, complete genomeExtracellular ligand-binding receptor5e-0756.2
NC_014834:2264108:2301627230162723029791353Rhodopseudomonas palustris DX-1 chromosome, complete genomeextracellular ligand-binding receptor6e-0755.8
NC_007511:719493:7310787310787322771200Burkholderia sp. 383 chromosome 2, complete sequenceABC branched chain amino acid family transporter, periplasmic ligand binding protein7e-0755.5
NC_013524:392089:4045654045654058811317Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomeExtracellular ligand-binding receptor8e-0755.5
NC_011001:2517159:2520322252032225214401119Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative amino acid ABC transporter solute binding protein9e-0755.1
NC_016147:2820232:2829724282972428308841161Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeextracellular ligand-binding receptor1e-0655.1
NC_005773:694990:6977246977246988601137Pseudomonas syringae pv. phaseolicola 1448A, complete genomehigh affinity branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein1e-0654.7
NC_015724:129331:1474211474211486171197Cupriavidus necator N-1 plasmid BB2p, complete sequencebranched-chain amino acid ABC transport system permease protein1e-0654.7
NC_016625:171341:2005792005792017031125Burkholderia sp. YI23 chromosome 2, complete sequenceextracellular ligand-binding receptor1e-0654.7
NC_007948:360199:3681863681863693161131Polaromonas sp. JS666, complete genomeExtracellular ligand-binding receptor1e-0654.3
NC_015376:3631392:3634852363485236361381287Burkholderia gladioli BSR3 chromosome chromosome 2, completeExtracellular ligand-binding receptor3e-0653.5
NC_014614:2295131:2313207231320723143821176Clostridium sticklandii, complete genomeExtracellular ligand-binding receptor precursor3e-0653.5
NC_017506:1100679:112632911263291127231903Marinobacter adhaerens HP15 chromosome, complete genomeABC-transporter substrate-binding protein3e-0653.5
NC_010511:4258000:4277695427769542789121218Methylobacterium sp. 4-46 chromosome, complete genomeextracellular ligand-binding receptor3e-0653.5
NC_010552:2089140:2092992209299220941101119Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceExtracellular ligand-binding receptor5e-0652.8
NC_008148:2053467:2058442205844220596981257Rubrobacter xylanophilus DSM 9941, complete genomeExtracellular ligand-binding receptor9e-0652
NC_014323:3976351:3980128398012839812701143Herbaspirillum seropedicae SmR1 chromosome, complete genomebranched-chain amino acid ABC transporter periplasmic protein1e-0551.6