Pre_GI: BLASTP Hits

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Query: NC_006361:4521820:4529755 Nocardia farcinica IFM 10152, complete genome

Start: 4529755, End: 4530690, Length: 936

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020302:1241504:124750612475061248498993Corynebacterium halotolerans YIM 70093 = DSM 44683, completeAraC family transcriptional regulator5e-33141
NC_009077:1725683:177062317706231771621999Mycobacterium sp. JLS, complete genomehelix-turn-helix- domain containing protein, AraC type1e-28127
NC_009338:555587:5624375624375635461110Mycobacterium gilvum PYR-GCK chromosome, complete genomehelix-turn-helix domain-containing protein2e-28126
NC_008705:1790222:1837844183784418389531110Mycobacterium sp. KMS, complete genomehelix-turn-helix- domain containing protein, AraC type2e-28126
NC_008705:1839983:1851259185125918523681110Mycobacterium sp. KMS, complete genomehelix-turn-helix- domain containing protein, AraC type2e-28126
NC_016604:3184855:3214230321423032152311002Mycobacterium rhodesiae NBB3 chromosome, complete genometranscriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain3e-25115
NC_012522:5847699:5855486585548658564901005Rhodococcus opacus B4, complete genomeputative thc operon regulatory protein4e-25115
NC_007298:1418500:145904814590481460040993Dechloromonas aromatica RCB, complete genomeHelix-turn-helix, AraC type1e-22107
NC_013947:326980:3285913285913296791089Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, AraC family2e-21103
NC_012721:2556160:2556160255616025571941035Burkholderia glumae BGR1 chromosome 2, complete genomeTranscriptional regulator, AraC family protein1e-20100
NC_015723:2550000:2553741255374125548051065Cupriavidus necator N-1 chromosome 2, complete sequenceAraC family transcriptional regulator8e-2097.8
NC_014118:987889:101553710155371016523987Burkholderia sp. CCGE1002 chromosome chromosome 2, completetranscriptional regulator, AraC family7e-1788.2
NC_015312:6717973:6725802672580267268601059Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeAraC family transcriptional regulator6e-1685.1
NC_016147:2964178:297845229784522979423972Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeAraC family regulatory protein2e-1377
NC_011666:1572487:159137615913761592359984Methylocella silvestris BL2, complete genometranscriptional regulator, AraC family2e-1273.2
NC_014814:3364336:337792233779223378278357Mycobacterium sp. Spyr1 chromosome, complete genometranscriptional regulator, AraC family4e-1272.4
NC_011000:1216430:1250917125091712520081092Burkholderia cenocepacia J2315 chromosome 1, complete sequenceAraC family regulatory protein5e-1272
NC_007492:3384077:340643334064333407407975Pseudomonas fluorescens PfO-1, complete genomeTranscriptional Regulator, AraC family1e-1171.2
NC_009077:2308634:231165523116552312050396Mycobacterium sp. JLS, complete genomehelix-turn-helix- domain containing protein, AraC type1e-1170.5
NC_004463:8401060:8411896841189684129091014Bradyrhizobium japonicum USDA 110, complete genometranscriptional regulatory protein1e-1170.5
NC_010676:2975572:298379829837982984772975Burkholderia phytofirmans PsJN chromosome 2, complete sequencetranscriptional regulator, AraC family1e-1067.4
NC_017328:2586171:258770325877032588329627Shigella flexneri 2002017 chromosome, complete genomeEthanolamine operon regulatory protein1e-1067
NC_004741:2526421:252820025282002528760561Shigella flexneri 2a str. 2457T, complete genomeputative ARAC-type regulatory protein2e-1067
NC_010468:1343228:1361194136119413622461053Escherichia coli ATCC 8739, complete genometranscriptional regulator, AraC family2e-1066.6
NC_010170:1580832:158669015866901587673984Bordetella petrii, complete genometranscriptional regulator, AraC family2e-1066.6
NC_007951:3655088:365508836550883656071984Burkholderia xenovorans LB400 chromosome 1, complete sequenceTranscriptional regulator, AraC family2e-1066.6
NC_008258:2542863:2543768254376825448201053Shigella flexneri 5 str. 8401, complete genomeputative ARAC-type regulatory protein2e-1066.6
NC_008545:115292:1348071348071358141008Burkholderia cenocepacia HI2424 plasmid 1, complete sequencetranscriptional regulator, AraC family5e-1065.5
NC_017986:4790482:481891148189114819822912Pseudomonas putida ND6 chromosome, complete genomeputative AraC family transcriptional regulator6e-1065.1
NC_011958:735755:786309786309787232924Rhodobacter sphaeroides KD131 chromosome 2, complete genomeHelix-turn-helix-domain containing protein, AraC type6e-1065.1
NC_007435:566436:5857705857705871971428Burkholderia pseudomallei 1710b chromosome II, complete sequenceHrpB7e-1065.1
NC_008061:2153495:2153495215349521545021008Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, AraC family7e-1065.1
NC_006351:1886475:1905540190554019069911452Burkholderia pseudomallei K96243 chromosome 2, complete sequenceAraC family regulator of pathogenicity genes8e-1064.7
NC_009078:1841023:1858480185848018599311452Burkholderia pseudomallei 1106a chromosome II, complete sequenceHrpB8e-1064.7
NC_009075:1906915:1924372192437219258231452Burkholderia pseudomallei 668 chromosome II, complete sequenceHrpB8e-1064.7
NC_017506:1100679:112975111297511130716966Marinobacter adhaerens HP15 chromosome, complete genomehypothetical protein1e-0963.9
NC_008392:1029134:1032894103289410339191026Burkholderia cepacia AMMD chromosome 3, complete sequencetranscriptional regulator, AraC family1e-0963.9
NC_010557:679656:7013457013457023731029Burkholderia ambifaria MC40-6 chromosome 3, complete sequencetranscriptional regulator, AraC family2e-0963.9
NC_014834:3472000:348281634828163483802987Rhodopseudomonas palustris DX-1 chromosome, complete genomeAraC family transcriptional regulator3e-0859.7
NC_015726:2177783:218982021898202190776957Cupriavidus necator N-1 chromosome 1, complete sequenceAraC family transcriptional regulator3e-0859.7
NC_007643:889755:8903188903188913341017Rhodospirillum rubrum ATCC 11170, complete genomeTranscriptional Regulator, AraC family5e-0858.5
NC_010067:3753971:377248937724893773352864Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein7e-0858.2
NC_007511:3103999:3124442312444231254461005Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, AraC family1e-0757.8
NC_008686:1439328:1461579146157914625801002Paracoccus denitrificans PD1222 chromosome 1, complete sequencehelix-turn-helix- domain containing protein, AraC type2e-0757
NC_009511:4582188:459546145954614596450990Sphingomonas wittichii RW1 chromosome, complete genomehelix-turn-helix domain-containing protein2e-0757
NC_007626:1202704:121542712154271216011585Magnetospirillum magneticum AMB-1, complete genomeAraC-type DNA-binding domain-containing protein2e-0756.6
NC_015566:5197624:521102552110255211780756Serratia sp. AS12 chromosome, complete genomeAraC family transcriptional regulator3e-0756.2
NC_016002:2652500:2664380266438026653991020Pseudogulbenkiania sp. NH8B, complete genomeAraC family transcriptional regulator4e-0755.8
NC_008702:1432952:1437635143763514386391005Azoarcus sp. BH72, complete genomeputative AraC-family transcriptional regulator5e-0755.5
NC_010682:1482365:149686514968651497827963Ralstonia pickettii 12J chromosome 1, complete sequencetranscriptional regulator, AraC family5e-0755.5
NC_019973:2417000:2437006243700624381151110Mesorhizobium australicum WSM2073, complete genomeDNA-binding domain-containing protein, AraC-type4e-0755.5
NC_015675:2567000:258730225873022588210909Mesorhizobium opportunistum WSM2075 chromosome, complete genomeAraC family transcriptional regulator6e-0755.1
NC_014923:2439197:246013724601372461012876Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completehelix-turn-helix- domain containing protein AraC type6e-0755.1
NC_009832:5214850:522908252290825229855774Serratia proteamaculans 568, complete genometranscriptional regulator, AraC family7e-0755.1
NC_014311:1888686:190829219082921909203912Ralstonia solanacearum PSI07 chromosome, complete genomearaC-type DNA-binding transcriptional regulator1e-0654.3
NC_008268:7576365:758670675867067587590885Rhodococcus sp. RHA1, complete genometranscriptional regulator1e-0653.9
NC_010676:3009980:301668130166813017520840Burkholderia phytofirmans PsJN chromosome 2, complete sequencetranscriptional regulator, AraC family2e-0653.5
NC_009512:3068495:308791530879153088736822Pseudomonas putida F1, complete genomehelix-turn-helix- domain containing protein, AraC type3e-0653.1
NC_011000:1216430:1245111124511112464931383Burkholderia cenocepacia J2315 chromosome 1, complete sequenceAraC family regulatory protein3e-0653.1
NC_014924:1701952:171627217162721717261990Pseudoxanthomonas suwonensis 11-1 chromosome, complete genometranscriptional regulator, AraC family2e-0653.1
NC_017986:5467279:546819554681955469016822Pseudomonas putida ND6 chromosome, complete genomeAraC family transcriptional regulator2e-0653.1
NC_008825:2564965:257942525794252580411987Methylibium petroleiphilum PM1, complete genomeputative AraC-family transcriptional regulator3e-0652.8
NC_010805:1642978:1668352166835216693561005Burkholderia multivorans ATCC 17616 chromosome 2, completeAraC family transcriptional regulator4e-0652.8
NC_007952:3196085:323128132312813232249969Burkholderia xenovorans LB400 chromosome 2, complete sequenceTranscriptional regulator, AraC family4e-0652.4
NC_018524:5748421:5774695577469557758101116Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomebacterial regulatory helix-turn-helix s, AraC family protein6e-0652
NC_002678:5714000:573007257300725730971900Mesorhizobium loti MAFF303099, complete genometranscriptional regulator9e-0651.2