Pre_GI: BLASTP Hits

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Query: NC_006350:1938631:1966393 Burkholderia pseudomallei K96243 chromosome 1, complete sequence

Start: 1966393, End: 1966929, Length: 537

Host Lineage: Burkholderia pseudomallei; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was a clinical isolate from Thailand. The genome of this organism carries many genomic islands as compared to the related organism B. mallei, suggesting extensive horizontal transfer. Opportunistic pathogen. This species is an opportunistic pathogen and can cause pneumonia, bacteremia, and melioidosis. It is normally found in terrestrial environments and has been recovered from rice paddies and moist tropical soil. It is endemic in Asia and Australia, but can be found in other parts of the world. The organism can exist intracellularly and can spread through the bloodstream (bacteremia).




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007298:2769525:279111027911102791682573Dechloromonas aromatica RCB, complete genomeRNA polymerase sigma-70 factor1e-52205
NC_009659:1024201:102623410262341026812579Janthinobacterium sp. Marseille chromosome, complete genomeRNA polymerase sigma factor5e-48190
NC_016616:134449:161234161234161806573Dechlorosoma suillum PS chromosome, complete genomesigma-70 family RNA polymerase sigma factor3e-47187
NC_011386:3723019:373535037353503735937588Oligotropha carboxidovorans OM5, complete genomeRNA polymerase sigma factor1e-34145
NC_014006:3124818:314359631435963144207612Sphingobium japonicum UT26S chromosome 1, complete genomeECF-type sigma factor9e-22102
NC_011365:1865687:187782918778291878332504Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit1e-1995.9
NC_010337:2793667:280469028046902805241552Heliobacterium modesticaldum Ice1, complete genomeRNA polymerase sigma factor1e-1272.8
NC_008358:263458:267448267448268089642Hyphomonas neptunium ATCC 15444, complete genomeRNA polymerase sigma-70 factor, ECF family9e-1269.7
NC_014306:1286248:130946213094621310028567Erwinia billingiae Eb661, complete genomeProbable RNA polymerase ECF-type sigma factor1e-1065.9
NC_003155:5253923:527524952752495275962714Streptomyces avermitilis MA-4680, complete genomeRNA polymerase sigma-70 factor2e-1065.1
NC_013929:5135285:515159451515945152304711Streptomyces scabiei 87.22 chromosome, complete genomesigma factor7e-1063.5
NC_015144:1576047:158985115898511590342492Weeksella virosa DSM 16922 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0962.8
NC_003888:4251867:428257742825774283287711Streptomyces coelicolor A3(2), complete genomeRNA polymerase sigma-70 factor1e-0962.4
NC_018750:3964784:398322139832213983961741Streptomyces venezuelae ATCC 10712, complete genomeRNA polymerase sigma-70 factor1e-0962.4
NC_013235:1325975:133005913300591330667609Nakamurella multipartita DSM 44233, complete genometranscriptional regulator, LuxR family6e-0960.5
NC_009012:2953638:301233430123343012897564Clostridium thermocellum ATCC 27405, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0858.2
NC_018679:2211000:223032922303292230931603Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completeECF subfamily RNA polymerase sigma-24 factor3e-0858.2
NC_019896:1483073:148418814841881484718531Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeRNA polymerase sigma factor SigZ3e-0857.8
NC_012483:1567253:158365615836561584234579Acidobacterium capsulatum ATCC 51196, complete genomeRNA polymerase sigma-70 factor, ECF subfamily4e-0857.8
NC_013169:612456:641378641378641875498Kytococcus sedentarius DSM 20547, complete genomeRNA polymerase sigma factor, sigma-70 family4e-0857.8
NC_011894:4911500:492350949235094924204696Methylobacterium nodulans ORS 2060, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-0857.4
NC_021182:3409199:341352734135273414072546Clostridium pasteurianum BC1, complete genomeRNA polymerase sigma factor, sigma-70 family6e-0857
NC_015656:632960:640915640915641499585Frankia symbiont of Datisca glomerata chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit8e-0856.6
NC_007517:3151742:315661031566103157230621Geobacter metallireducens GS-15, complete genomeRNA polymerase sigma-70 factor9e-0856.2
NC_014829:4422314:442603644260364426554519Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0756.2
NC_013730:2490000:249877424987742499262489Spirosoma linguale DSM 74, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0755.8
NC_004663:3801071:380107138010713801646576Bacteroides thetaiotaomicron VPI-5482, complete genomeRNA polymerase ECF-type sigma factor1e-0755.8
NC_019897:3810000:385687138568713857380510Thermobacillus composti KWC4 chromosome, complete genomeSigM family RNA polymerase sigma factor2e-0755.1
NC_009077:2308634:230980423098042310280477Mycobacterium sp. JLS, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-0754.3
NC_007298:2170181:217566021756602176259600Dechloromonas aromatica RCB, complete genomeRNA polymerase sigma-70 factor6e-0753.5
NC_013929:3953046:396964339696433970329687Streptomyces scabiei 87.22 chromosome, complete genomesigma factor7e-0753.5
NC_014829:1376253:138816813881681388734567Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily7e-0753.5
NC_009668:1726000:173066117306611731212552Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceECF subfamily RNA polymerase sigma-24 factor2e-0652.4
NC_019892:9207246:920669292066929207249558Singulisphaera acidiphila DSM 18658 chromosome, complete genomesigma-70 family RNA polymerase sigma factor2e-0652.4
NC_018867:179975:195631195631196215585Dehalobacter sp. CF chromosome, complete genomeRNA polymerase sigma factor SigZ1e-0652.4
NC_018866:108812:128036128036128620585Dehalobacter sp. DCA chromosome, complete genomeRNA polymerase sigma factor SigZ1e-0652.4
NC_014814:3364336:337963933796393380121483Mycobacterium sp. Spyr1 chromosome, complete genomeRNA polymerase sigma factor, sigma-70 family1e-0652.4
NC_015953:3684065:370288037028803703584705Streptomyces sp. SirexAA-E chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit2e-0652
NC_010511:7553703:757897775789777579660684Methylobacterium sp. 4-46 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 factor2e-0652
NC_015311:720631:726166726166726678513Prevotella denticola F0289 chromosome, complete genomeSigma-70 region 22e-0652
NC_012982:711122:746813746813747382570Hirschia baltica ATCC 49814, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0652
NC_013595:4951396:496504449650444965529486Streptosporangium roseum DSM 43021, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-0651.6
NC_016114:3655005:367332236733223674023702Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit3e-0651.2
NC_009921:565947:579529579529580140612Frankia sp. EAN1pec, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-0651.2
NC_012704:376783:395308395308395919612Corynebacterium kroppenstedtii DSM 44385, complete genomeECF-family sigma factor D4e-0650.8
NC_015556:2265940:230300923030092303524516Pseudomonas fulva 12-X chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-0650.8
NC_015953:4908069:492497149249714925813843Streptomyces sp. SirexAA-E chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit4e-0650.8
NC_013440:1727134:174839817483981749084687Haliangium ochraceum DSM 14365, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily6e-0650.4
NC_004663:4373902:437668943766894377198510Bacteroides thetaiotaomicron VPI-5482, complete genomeRNA polymerase ECF-type sigma factor8e-0650.1
NC_019897:329945:346389346389346979591Thermobacillus composti KWC4 chromosome, complete genomesigma-70 family RNA polymerase sigma factor7e-0650.1
NC_008027:2648560:265202626520262652541516Pseudomonas entomophila L48, complete genomeRNA polymerase sigma-70 factor, ECF subfamily7e-0650.1
NC_009953:3316782:3328358332835833294311074Salinispora arenicola CNS-205 chromosome, complete genomeRNA polymerase factor sigma-707e-0650.1
NC_017986:5467279:548737254873725487980609Pseudomonas putida ND6 chromosome, complete genomeRNA polymerase sigma factor7e-0650.1
NC_011894:2811573:282499228249922825498507Methylobacterium nodulans ORS 2060, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0549.7