Pre_GI: BLASTP Hits

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Query: NC_006177:2398482:2442139 Symbiobacterium thermophilum IAM 14863, complete genome

Start: 2442139, End: 2443311, Length: 1173

Host Lineage: Symbiobacterium thermophilum; Symbiobacterium; Shewanellaceae; Clostridiales; Firmicutes; Bacteria

General Information: This symbiotic and thermophilic bacterium was discovered by screening for thermostable tryptanophases in Japanese compost. Cultured growth of this organism requires the presence of another bacterial species, such as a Bacillus or Escherichia coli, which provides diffusable metabolites required for its growth. Pure cultures can be obtained by growing Symbiobacterium thermophilum in a bioreactor, separated from its symbiotic counterpart by a dialysis membrane. Because of its symbiotic nature, it cannot be cultured with conventional methods. Despite a negative reaction for gram stain, this species is placed with the gram-positive bacteria based on 16s phylogenetic analysis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014103:3985897:4000185400018540044954311Bacillus megaterium DSM319 chromosome, complete genomeDNA polymerase III subunit alpha3e-1169.7
NC_003909:3606177:3606177360617736090892913Bacillus cereus ATCC 10987, complete genomeDNA polymerase III, alpha subunit, Gram-positive type2e-1067
NC_007530:3616828:3629517362951736338184302Bacillus anthracis str. 'Ames Ancestor', complete genomeDNA polymerase III subunit alpha3e-1066.6
NC_005945:3615623:3630085363008536343864302Bacillus anthracis str. Sterne, complete genomeDNA polymerase III subunit alpha3e-1066.6
NC_014335:3567931:3580242358024235845434302Bacillus cereus biovar anthracis str. CI chromosome, completeDNA polymerase III subunit alpha3e-1066.6
NC_009674:2551759:2564124256412425684254302Bacillus cytotoxicus NVH 391-98 chromosome, complete genomeDNA polymerase III PolC3e-1066.6
NC_008600:3643905:3660271366027136631892919Bacillus thuringiensis str. Al Hakam, complete genomeDNA polymerase III, alpha subunit3e-1066.6
NC_016779:3579743:3596109359610935990212913Bacillus cereus F837/76 chromosome, complete genomeDNA polymerase III subunit alpha3e-1066.6
NC_012472:3661912:3678278367827836811902913Bacillus cereus 03BB102, complete genomeDNA polymerase III, PolC-type3e-1066.6
NC_006274:3697255:3709943370994337142444302Bacillus cereus E33L, complete genomeDNA polymerase III subunit alpha3e-1066.6
NC_005957:3638750:3651061365106136553624302Bacillus thuringiensis serovar konkukian str. 97-27, completeDNA polymerase III subunit alpha3e-1066.6
NC_016771:3555506:3569931356993135742324302Bacillus cereus NC7401, complete genomeDNA polymerase III subunit alpha3e-1066.6
NC_011658:3603009:3617434361743436217354302Bacillus cereus AH187 chromosome, complete genomeDNA polymerase III PolC3e-1066.6
NC_011969:3549000:3561396356139635656974302Bacillus cereus Q1 chromosome, complete genomeDNA polymerase iii polc3e-1066.6
NC_012659:3617000:3629417362941736337184302Bacillus anthracis str. A0248, complete genomeDNA polymerase III PolC3e-1066.6
NC_012581:559182:6048696048696091704302Bacillus anthracis str. CDC 684 chromosome, complete genomeDNA polymerase III PolC3e-1066.6
NC_011773:3651963:3664276366427636685774302Bacillus cereus AH820 chromosome, complete genomeDNA polymerase III PolC3e-1066.6
NC_003997:3617000:3629390362939036336914302Bacillus anthracis str. Ames, complete genomeDNA polymerase III subunit alpha3e-1066.6
NC_004722:3777907:3790222379022237945294308Bacillus cereus ATCC 14579, complete genomeDNA polymerase III subunit alpha5e-1065.9
NC_011772:3787500:3799826379982638041274302Bacillus cereus G9842, complete genomeDNA polymerase III, alpha subunit, Gram-positive type5e-1065.9
NC_017208:3816753:3829460382946038337614302Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeDNA polymerase III PolC5e-1065.9
NC_011725:3821789:3834107383410738384084302Bacillus cereus B4264 chromosome, complete genomeDNA polymerase III PolC5e-1065.9
NC_014171:3701051:3713367371336737176684302Bacillus thuringiensis BMB171 chromosome, complete genomeDNA polymerase III PolC5e-1065.9
NC_010184:3675424:3688149368814936924504302Bacillus weihenstephanensis KBAB4, complete genomeDNA polymerase III, alpha subunit8e-1065.1
NC_015975:1056731:1056731105673110610804350Lactobacillus ruminis ATCC 27782 chromosome, complete genomeDNA polymerase III PolC3e-0963.2
NC_006449:58436:7157471574759684395Streptococcus thermophilus CNRZ1066, complete genomeDNA polymerase III subunit alpha5e-0962.8
NC_006448:59654:7279172791771854395Streptococcus thermophilus LMG 18311, complete genomeDNA polymerase III subunit alpha5e-0962.8
NC_014727:1292213:1315998131599813203354338Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,DNA polymerase iii, alpha subunit (gram-positive type) (polc)8e-0962
NC_015589:1899329:1899329189932919036064278Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeDNA polymerase III subunit alpha9e-0961.6
NC_009253:2139379:2156194215619421604744281Desulfotomaculum reducens MI-1 chromosome, complete genomeDNA polymerase III subunit alpha8e-0961.6
NC_015760:61345:7446974469788634395Streptococcus salivarius CCHSS3, complete genomeDNA polymerase III polC-type (PolIII)1e-0861.2
NC_008609:2518993:253566125356612536173513Pelobacter propionicus DSM 2379, complete genomeDNA-directed DNA polymerase1e-0861.2
NC_019970:1343670:1355741135574113599734233Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeDNA polymerase III, alpha chain2e-0860.8
NC_014722:771483:789311789311790054744Burkholderia rhizoxinica HKI 454, complete genomeDNA polymerase III, epsilon chain3e-0860.1
NC_007802:179780:185734185734186429696Jannaschia sp. CCS1, complete genomeDNA polymerase III, epsilon subunit3e-0860.1
NC_011898:513835:5162685162685205694302Clostridium cellulolyticum H10, complete genomeDNA polymerase III, alpha subunit3e-0860.1
NC_015572:2186394:2188322218832221897221401Methylomonas methanica MC09 chromosome, complete genomeDNA polymerase III subunit epsilon3e-0859.7
NC_009381:1783886:182654518265451827309765Yersinia pestis Pestoides F chromosome, complete genomeDNA polymerase III subunit epsilon5e-0859.3
NC_004088:3382148:340481234048123405576765Yersinia pestis KIM, complete genomeDNA polymerase III subunit epsilon5e-0859.3
NC_008149:3251196:327387932738793274643765Yersinia pestis Nepal516, complete genomeDNA polymerase III, epsilon chain5e-0859.3
NC_008044:3024125:302766930276693028400732Silicibacter sp. TM1040, complete genomeDNA polymerase III, epsilon subunit9e-0858.2
NC_005085:1269787:132217013221701322889720Chromobacterium violaceum ATCC 12472, complete genomeDNA-directed DNA polymerase, epsilon chain2e-0757.4
NC_009488:1165927:118756911875691188237669Orientia tsutsugamushi str. Boryong, complete genomeDNA polymerase III epsilon chain2e-0757
NC_012121:897866:9022149022149065274314Staphylococcus carnosus subsp. carnosus TM300, complete genomehomolog of DNA polymerase III, alpha subunit5e-0755.8
NC_015554:4724245:4724245472424547263772133Alteromonas sp. SN2 chromosome, complete genomeDNA polymerase III, epsilon subunit6e-0755.8
NC_007622:1214629:1218890121889012232064317Staphylococcus aureus RF122, complete genomeDNA polymerase III2e-0653.9
NC_013204:3613824:3619594361959436224942901Eggerthella lenta DSM 2243, complete genomeDNA polymerase III, epsilon subunit2e-0653.9
NC_004461:921364:9423929423929467204329Staphylococcus epidermidis ATCC 12228, complete genomeDNA polymerase III, alpha chain PolC-type2e-0653.5
NC_013315:1370000:1372091137209113763894299Clostridium difficile CD196 chromosome, complete genomeDNA polymerase III PolC-type4e-0653.1
NC_017179:1378875:1381865138186513861634299Clostridium difficile BI1, complete genomeDNA polymerase III PolC-type4e-0653.1
NC_009782:1327340:1331601133160113359174317Staphylococcus aureus subsp. aureus Mu3, complete genomeDNA polymerase III alpha chain PolC-type5e-0652.8
NC_017341:1291583:1295844129584413001604317Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,DNA polymerase III subunit alpha5e-0652.8
NC_017338:1234077:1236038123603812403544317Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeDNA polymerase III subunit alpha5e-0652.4
NC_002952:1291444:1295705129570513000214317Staphylococcus aureus subsp. aureus MRSA252, complete genomeDNA polymerase III PolC-type5e-0652.4
NC_017353:1699652:1711348171134817156644317Staphylococcus lugdunensis N920143, complete genomeDNA polymerase III PolC-type6e-0652.4
NC_007517:3430237:345016934501693450825657Geobacter metallireducens GS-15, complete genomeDNA polymerase III, epsilon subunit7e-0652