Pre_GI: BLASTP Hits

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Query: NC_006155:2116834:2122130 Yersinia pseudotuberculosis IP 32953, complete genome

Start: 2122130, End: 2122639, Length: 510

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a fully virulent serotype I strain isolated from a human patient. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020211:4598217:461323446132344613743510Serratia marcescens WW4, complete genomephage regulatory CII family protein3e-64243
NC_014306:1244721:125003212500321250541510Erwinia billingiae Eb661, complete genomePhage regulatory CII family protein1e-47189
NC_012917:3565268:357732935773293577838510Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeregulatory CII family protein2e-47187
NC_014837:2458780:247114224711422471651510Pantoea sp. At-9b chromosome, complete genomeregulatory CII family protein4e-47187
NC_014500:894136:920427920427920936510Dickeya dadantii 3937 chromosome, complete genomeRegulatory protein CII4e-47186
NC_013592:804288:822485822485822994510Dickeya dadantii Ech586, complete genomeregulatory CII family protein1e-46185
NC_015061:596247:612574612574613080507Rahnella sp. Y9602 chromosome, complete genomeregulatory protein CII bacteriophage 1862e-46184
NC_015061:2770856:277872327787232779232510Rahnella sp. Y9602 chromosome, complete genomeregulatory CII family protein9e-46182
NC_006511:2718401:272430327243032724833531Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative phage gene4e-45180
NC_011147:2713937:271983927198392720369531Salmonella enterica subsp. enterica serovar Paratyphi A strphage protein4e-45180
NC_013956:3525711:354228535422853542794510Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein2e-44178
NC_003197:2870268:287527828752782875787510Salmonella typhimurium LT2, complete genomehypothetical protein3e-44177
NC_011149:2802199:281827228182722818781510Salmonella enterica subsp. enterica serovar Agona str. SL483,phage regulatory protein3e-44177
NC_016860:2896254:289884428988442899353510Salmonella enterica subsp. enterica serovar Typhimurium strphage regulatory protein3e-44177
NC_013282:3389619:340414834041483404657510Cronobacter turicensis, complete genomeRegulatory protein CII3e-44177
NC_011742:2823000:282843128284312828940510Escherichia coli S88 chromosome, complete genomeregulatory protein cII8e-44176
NC_009436:3807420:381195838119583812467510Enterobacter sp. 638, complete genomephage regulatory CII family protein7e-44176
NC_011601:846358:857051857051857560510Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeregulatory protein6e-44176
NC_006511:2677964:269293126929312693440510Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCphage regulatory protein5e-44176
NC_003198:4453457:450470845047084505217510Salmonella enterica subsp. enterica serovar Typhi str. CT18,phage regulatory protein5e-44176
NC_011147:2676972:268846726884672688976510Salmonella enterica subsp. enterica serovar Paratyphi A strphage regulatory protein5e-44176
NC_010694:614985:630293630293630802510Erwinia tasmaniensis, complete genomePhage regulatory protein5e-44176
NC_020260:312805:319980319980320489510Cronobacter sakazakii Sp291, complete genomehypothetical protein4e-44176
NC_016810:2871689:288595328859532886462510Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage regulatory protein2e-43174
NC_016857:2871689:288595328859532886462510Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74phage regulatory protein2e-43174
NC_017046:2869873:288469528846952885204510Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage regulatory protein2e-43174
NC_012125:894955:921486921486921989504Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein4e-43173
NC_011080:2870428:287551428755142876017504Salmonella enterica subsp. enterica serovar Newport str. SL254,regulatory protein CII bacteriophage 1861e-42172
NC_009648:3803622:383244238324423832951510Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative prophage protein for establishment of lysogeny3e-42171
NC_009436:1466580:147853314785331479042510Enterobacter sp. 638, complete genomephage regulatory CII family protein2e-42171
NC_014837:3766426:378110237811023781611510Pantoea sp. At-9b chromosome, complete genomeregulatory CII family protein1e-42171
NC_016845:4046142:405227840522784052787510Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,gp316e-41166
NC_020181:5182568:519431351943135194822510Enterobacter aerogenes EA1509E, complete genomeRegulatory protein CII6e-40163
NC_014562:2871765:287632228763222876831510Pantoea vagans C9-1 chromosome, complete genomeRegulatory protein CII1e-33142
NC_011205:2938356:295352829535282953974447Salmonella enterica subsp. enterica serovar Dublin str. CT_020218532e-32138
NC_012947:2898179:2906082290608229075271446Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeregulatory CII family protein8e-32135
NC_015424:2726223:275689127568912757400510Aeromonas veronii B565 chromosome, complete genomephage protein9e-2199.4
NC_009348:4135002:415310241531024153635534Aeromonas salmonicida subsp. salmonicida A449, complete genomephage protein2e-1892
NC_009348:1663870:166795316679531668474522Aeromonas salmonicida subsp. salmonicida A449, complete genomephage protein2e-1788.2
NC_009784:253852:267391267391267930540Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequencehypothetical protein3e-1374.3
NC_016628:373815:386881386881387420540Vibrio furnissii NCTC 11218 chromosome 2, complete sequencephage regulatory protein (CII)2e-1065.1