Pre_GI: BLASTP Hits

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Query: NC_005139:2201820:2271404 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 2271404, End: 2272330, Length: 927

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014039:1766049:177515917751591776049891Propionibacterium acnes SK137 chromosome, complete genometranscriptional regulator, RpiR family3e-1479.3
NC_016516:1751336:176410717641071764895789Propionibacterium acnes TypeIA2 P.acn33 chromosome, completeRpiR family transcriptional regulator1e-1377.4
NC_014657:1193985:119567511956751196538864Caldicellulosiruptor owensensis OL chromosome, complete genometranscriptional regulator, rpir family2e-1273.2
NC_013124:2063460:206463220646322065471840Acidimicrobium ferrooxidans DSM 10331, complete genometranscriptional regulator, RpiR family2e-1170.1
NC_020063:2449554:247206824720682472898831Enterobacteriaceae bacterium strain FGI 57, complete genometranscriptional regulator1e-1067.4
NC_011745:291422:310012310012310845834Escherichia coli ED1a chromosome, complete genomeputative transcriptional regulator1e-1067
NC_015389:616430:639327639327640196870Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, RpiR family4e-1065.9
NC_008800:4389687:438968743896874390520834Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein5e-1065.5
NC_004129:2440744:245737724573772458264888Pseudomonas fluorescens Pf-5, complete genomeSIS domain protein1e-0964.3
NC_019973:5869500:588133358813335882238906Mesorhizobium australicum WSM2073, complete genometranscriptional regulator4e-0858.9
NC_014923:5940500:595237359523735953278906Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completesugar isomerase (SIS)4e-0858.9
NC_015675:6493444:650704465070446507949906Mesorhizobium opportunistum WSM2075 chromosome, complete genomeRpiR family transcriptional regulator4e-0858.9
NC_016630:1385719:139135113913511392217867Filifactor alocis ATCC 35896 chromosome, complete genometranscriptional regulator5e-0858.5
NC_016605:132253:139861139861140607747Pediococcus claussenii ATCC BAA-344 chromosome, complete genomehelix-turn-helix domain, rpiR family protein7e-0858.2
NC_017154:3094000:311353131135313114385855Yersinia pestis D106004 chromosome, complete genomehypothetical protein7e-0755.1
NC_003143:2895617:289561728956172896471855Yersinia pestis CO92, complete genomehypothetical protein7e-0755.1
NC_004088:1291754:129175412917541292608855Yersinia pestis KIM, complete genomehypothetical protein7e-0755.1
NC_008149:1221637:122163712216371222491855Yersinia pestis Nepal516, complete genomehypothetical protein7e-0755.1
NC_017347:2437902:244281024428102443574765Staphylococcus aureus subsp. aureus T0131 chromosome, completePhosphosugar-binding transcriptional regulator9e-0754.7
NC_011958:1031592:106964510696451070505861Rhodobacter sphaeroides KD131 chromosome 2, complete genomeTranscriptional regulator, RpiR family1e-0654.3
NC_010505:5035668:504276550427655043655891Methylobacterium radiotolerans JCM 2831, complete genometranscriptional regulator, RpiR family9e-0754.3
NC_015379:3570658:359231735923173593171855Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,conserved hypothetical protein, containing Helix-turn-helix domain, rpiR family3e-0652.8
NC_013192:171000:189492189492190352861Leptotrichia buccalis DSM 1135, complete genometranscriptional regulator, RpiR family4e-0652.4
NC_015389:114469:120227120227121075849Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, RpiR family4e-0652.4
NC_014323:3976351:402026640202664021225960Herbaspirillum seropedicae SmR1 chromosome, complete genometranscription regulator protein7e-0651.6
NC_008254:3980327:399500239950023995925924Mesorhizobium sp. BNC1, complete genometranscriptional regulator, RpiR family9e-0651.2