Pre_GI Gene

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Host: NC_011745 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011745:291422 Escherichia coli ED1a chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated in the 2000s from the faeces of a healthy man in France. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2914222926661245fermentationrespiration switch proteinQuickGO ontologyBLASTP
292724293125402DNA-binding transcriptional regulator CrlQuickGO ontologyBLASTP
2931642942191056outer membrane phosphoporin protein EQuickGO ontologyBLASTP
2945082956111104gamma-glutamyl kinaseQuickGO ontologyBLASTP
2956232968761254gamma-glutamyl phosphate reductaseQuickGO ontologyBLASTP
29699129706676tRNA-ThrQuickGO ontologyBLASTP
297377298057681hypothetical proteinBLASTP
2980592996961638hypothetical proteinBLASTP
300366300614249putative AlpA-family regulatory protein from prophageQuickGO ontologyBLASTP
303545304108564hypothetical proteinBLASTP
3042393066292391putative helicaseQuickGO ontologyBLASTP
306647307027381hypothetical proteinBLASTP
306893307204312hypothetical proteinBLASTP
307301308278978hypothetical proteinBLASTP
310012310845834putative transcriptional regulatorQuickGO ontologyBLASTP
311068312057990transposase IS110 familyQuickGO ontologyBLASTP
31203331213199hypothetical proteinBLASTP
3124753139681494D-xylose-proton symporterQuickGO ontologyBLASTP
3143793158151437Sugar And other transporterQuickGO ontologyBLASTP