Pre_GI: BLASTP Hits

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Query: NC_004631:1271500:1271599 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 1271599, End: 1272135, Length: 537

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:1359769:136132313613231361859537Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative regulatory protein1e-91335
NC_003198:1693623:170899517089951709531537Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein1e-91335
NC_011083:1408202:140820214082021408738537Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein1e-91335
NC_010102:1703172:171854117185411719077537Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-91335
NC_003197:1401603:140315714031571403693537Salmonella typhimurium LT2, complete genomeputative regulatory protein1e-91335
NC_011205:1938574:195393219539321954468537Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein1e-91335
NC_016810:1358456:136001013600101360546537Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-91335
NC_016832:1269018:127057212705721271108537Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-91335
NC_016856:1411579:141313314131331413669537Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative regulatory protein1e-91335
NC_016857:1358456:136001013600101360546537Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein1e-91335
NC_016860:1399290:140084414008441401380537Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-91335
NC_011274:1850086:186545418654541865990537Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein3e-91333
NC_011294:1810285:182564318256431826179537Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein3e-91333
NC_016831:1166868:116842211684221168958537Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein1e-90331
NC_011147:1573470:159032815903281590864537Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein4e-90330
NC_006511:1579776:159514715951471595683537Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein4e-90330
NC_020063:2565605:259632625963262596862537Enterobacteriaceae bacterium strain FGI 57, complete genomehypothetical protein3e-74277
NC_017046:1358531:136019013601901360621432Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein2e-71267
NC_017168:2999514:301819930181993018753555Yersinia pestis A1122 chromosome, complete genomeputative yfeABCD locus regulator2e-64244
NC_009381:775357:799323799323799877555Yersinia pestis Pestoides F chromosome, complete genomeyfeABCD locus regulator2e-64244
NC_003143:2741478:274368027436802744234555Yersinia pestis CO92, complete genomeputative yfeABCD locus regulator2e-64244
NC_012880:2399205:240889324088932409441549Dickeya dadantii Ech703, complete genomehypothetical protein1e-55215