Pre_GI: BLASTP Hits

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Query: NC_004603:230000:242793 Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete

Start: 242793, End: 244031, Length: 1239

Host Lineage: Vibrio parahaemolyticus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a clinical strain isolated in 1996 in Osaka, Japan. It contains a type III secretion system which may enable colonization and penetration of the host intestinal epithelial layer, and possibly lead to septicemia. The genome contains multipe chromosomal rearrangements as compared to Vibrio cholerae. The organism also produces a hemolysin (thermostable direct hemolysin - TDH) that is particular to Vibrio parahaemolyticus. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. This species causes food poisoning (gastroenteritis) in countries that have elevated levels of seafood consumption such as Japan.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014221:792363:7979727979727991951224Truepera radiovictrix DSM 17093 chromosome, complete genomeglycosyl transferase group 16e-99361
NC_013235:5849659:5862666586266658639761311Nakamurella multipartita DSM 44233, complete genomeglycosyl transferase group 17e-97354
NC_011662:1211660:1234068123406812352851218Thauera sp. MZ1T, complete genomeglycosyl transferase group 14e-64245
NC_018080:1834754:1857562185756218587791218Pseudomonas aeruginosa DK2 chromosome, complete genomegroup 1 glycosyl transferase7e-59228
NC_005139:343500:3694343694343706931260Vibrio vulnificus YJ016 chromosome I, complete sequencepredicted glycosyltransferase4e-57222
NC_011026:2533017:2562958256295825641931236Chloroherpeton thalassium ATCC 35110, complete genomeglycosyl transferase group 13e-35149
NC_007517:1676604:1700231170023117014931263Geobacter metallireducens GS-15, complete genomeGlycosyl transferase, group 13e-33143
NC_007759:2608173:2609198260919826104211224Syntrophus aciditrophicus SB, complete genomeglycosyltransferase2e-30134
NC_014355:2321957:2342395234239523436451251Candidatus Nitrospira defluvii, complete genomeglycosyl transferase group 1 protein4e-30132
NC_009783:670449:6909076909076921301224Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein2e-27124
NC_010162:10208521:1021343910213439102147041266Sorangium cellulosum 'So ce 56', complete genomeglycosyltransferase1e-27124
NC_011768:1718869:1760363176036317616311269Desulfatibacillum alkenivorans AK-01, complete genomeglycosyl transferase group 11e-27124
NC_005085:4335333:4347018434701843482441227Chromobacterium violaceum ATCC 12472, complete genomeprobable glycosyl transferase9e-28124
NC_015388:2921000:2939891293989129410991209Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeglycosyl transferase group 14e-27122
NC_014935:1704816:1713580171358017148001221Nitratifractor saLSUginis DSM 16511 chromosome, complete genomeglycosyl transferase group 15e-27122
NC_013194:3724500:3730798373079837320331236Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeglycosyl transferase group 16e-27122
NC_016148:1877711:1884568188456818857971230Thermovirga lienii DSM 17291 chromosome, complete genomegroup 1 glycosyl transferase2e-26120
NC_012559:2663747:2673277267327726745421266Laribacter hongkongensis HLHK9, complete genomeGlycosyl transferase group 18e-25115
NC_008819:785447:7926877926877939341248Prochlorococcus marinus str. NATL1A, complete genomeGlycosyltransferase-like protein3e-24112
NC_011297:415760:4336134336134348421230Dictyoglomus thermophilum H-6-12, complete genomeWblI protein3e-22106
NC_006513:3486558:3506223350622335074521230Azoarcus sp. EbN1, complete genomepredicted glycosyltransferase7e-22105
NC_018691:1822731:1841021184102118422561236Alcanivorax dieselolei B5 chromosome, complete genomeGlycosyl transferase group 17e-21102
NC_019964:1031660:1037358103735810386231266Halovivax ruber XH-70, complete genomeglycosyltransferase2e-20100
NC_008782:3167440:3199090319909032003221233Acidovorax sp. JS42, complete genomeglycosyl transferase, group 14e-2099.4
NC_009483:1936486:1967532196753219687581227Geobacter uraniireducens Rf4 chromosome, complete genomegroup 1 glycosyl transferase9e-2098.2
NC_011060:514874:5592305592305604441215Pelodictyon phaeoclathratiforme BU-1, complete genomeglycosyl transferase group 13e-1996.3
NC_014313:165490:1815021815021827311230Hyphomicrobium denitrificans ATCC 51888 chromosome, completeglycosyl transferase group 12e-1894
NC_012673:785718:8096138096138108301218Exiguobacterium sp. AT1b, complete genomeglycosyl transferase group 11e-1791.7
NC_007530:5006319:5010648501064850118891242Bacillus anthracis str. 'Ames Ancestor', complete genomeglycosyl transferase, group 1 family protein7e-1789
NC_003997:5006193:5010522501052250117631242Bacillus anthracis str. Ames, complete genomeglycosyl transferase, group 1 family protein7e-1789
NC_005945:5011857:5011857501185750130981242Bacillus anthracis str. Sterne, complete genomeglycosyl transferase, group 1 family protein7e-1789
NC_012581:5008749:5013078501307850143191242Bacillus anthracis str. CDC 684 chromosome, complete genomeglycoside hydrolase family protein7e-1789
NC_012659:5006219:5010548501054850117891242Bacillus anthracis str. A0248, complete genomeglycosyl transferase, group 1 family7e-1789
NC_015160:1117371:1122806112280611240201215Odoribacter splanchnicus DSM 20712 chromosome, complete genomeglycosyl transferase group 11e-1688.2
NC_014931:5088125:5101178510117851024071230Variovorax paradoxus EPS chromosome, complete genomeglycosyl transferase group 12e-1687
NC_013791:1291339:1300099130009913013581260Bacillus pseudofirmus OF4 chromosome, complete genomeglycosyltransferase1e-1584.3
NC_015500:2112975:2119571211957121207971227Treponema brennaborense DSM 12168 chromosome, complete genomeglycosyl transferase group 11e-1584.3
NC_008781:3302934:3309376330937633106141239Polaromonas naphthalenivorans CJ2, complete genomeglycosyl transferase, group 17e-1582
NC_015152:272500:2817142817142829281215Spirochaeta sp. Buddy chromosome, complete genomeglycosyl transferase group 13e-1480.1
NC_014011:1760793:1768071176807117693181248Aminobacterium colombiense DSM 12261 chromosome, complete genomeglycosyl transferase group 15e-1479.3
NC_009921:2565640:2590153259015325917061554Frankia sp. EAN1pec, complete genomeglycosyl transferase group 11e-1378.2
NC_009675:5187452:5191268519126851925361269Anaeromyxobacter sp. Fw109-5 chromosome, complete genomegroup 1 glycosyl transferase1e-1377.8
NC_012660:1804610:1822674182267418238911218Pseudomonas fluorescens SBW25 chromosome, complete genomeputative glycosyltransferase2e-1377.4
NC_014033:103020:1281571281571294311275Prevotella ruminicola 23 chromosome, complete genomegroup 1 family glycosyltransferase2e-1377.4
NC_014958:3131191:3137624313762431388441221Deinococcus maricopensis DSM 21211 chromosome, complete genomegroup 1 glycosyl transferase3e-1376.6
NC_000853:771746:7869237869237881191197Thermotoga maritima MSB8, complete genomelipopolysaccharide biosynthesis protein, putative6e-1375.9
NC_009486:155651:1601321601321613281197Thermotoga petrophila RKU-1 chromosome, complete genomegroup 1 glycosyl transferase2e-1273.9
NC_013642:545464:5606335606335618291197Thermotoga naphthophila RKU-10, complete genomeglycosyl transferase group 12e-1273.9
NC_014323:4792048:4823904482390448251271224Herbaspirillum seropedicae SmR1 chromosome, complete genomeglycosyltransferase group 1 protein4e-1273.2
NC_014394:3036758:3045734304573430469631230Gallionella capsiferriformans ES-2 chromosome, complete genomeglycosyl transferase group 17e-1272
NC_015145:2693749:2708283270828327095121230Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomeglycosyltransferase2e-1170.9
NC_007298:2568851:2598951259895126001711221Dechloromonas aromatica RCB, complete genomeGlycosyl transferase, group 13e-1170.1
NC_014624:2368078:2379287237928723805191233Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein4e-1169.7
NC_015172:1621223:1628091162809116293441254Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeglycosyl transferase group 17e-1168.9
NC_000853:648075:6658686658686671721305Thermotoga maritima MSB8, complete genomelipopolysaccharide biosynthesis protein8e-1168.6
NC_011296:463359:4830964830964843041209Thermodesulfovibrio yellowstonii DSM 11347, complete genomelipopolysaccharide biosynthesis protein1e-1067.8
NC_009254:1116174:1120139112013911214041266Burkholderia vietnamiensis G4 chromosome 3, complete sequenceglycosyl transferase2e-1067.4
NC_007677:241846:2927762927762940321257Salinibacter ruber DSM 13855, complete genomeputative colanic acid biosynthesis glycosyl transferase2e-1067.4
NC_005823:2566588:2584188258418825853751188Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130colanic acid biosynthesis glycosyl-transferase2e-1067
NC_017075:4421486:4455574445557444567851212Rubrivivax gelatinosus IL144, complete genomegroup 1 glycosyl transferase2e-1067
NC_015738:760309:7634087634087646581251Eggerthella sp. YY7918, complete genomehypothetical protein2e-1067
NC_002516:3519000:3530467353046735317081242Pseudomonas aeruginosa PAO1, complete genomeprobable glycosyl transferase WbpJ3e-1066.6
NC_016633:1798758:1809348180934818105861239Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeglycosyltransferase5e-1065.9
NC_013410:3280039:3321175332117533224041230Fibrobacter succinogenes subsp. succinogenes S85 chromosome,group 1 glycosyl transferase1e-0964.7
NC_015761:2062345:2090157209015720913801224Salmonella bongori NCTC 12419, complete genomeglycosyltransferase3e-0963.5
NC_014550:1581812:1607661160766116088361176Arthrobacter arilaitensis Re117, complete genomeputative group 1 glycosyl transferase3e-0963.2
NC_011901:2202690:2219246221924622205111266Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeglycosyl transferase4e-0962.8
NC_008699:4443000:4458256445825644595121257Nocardioides sp. JS614, complete genomeglycosyl transferase, group 16e-0962.4
NC_015572:1421782:1459778145977814609771200Methylomonas methanica MC09 chromosome, complete genomegroup 1 glycosyl transferase8e-0962
NC_004431:2383901:2412059241205924132821224Escherichia coli CFT073, complete genomePutative colanic acid biosynthesis glycosyl transferase wcaI8e-0962
NC_009439:2038303:2060651206065120618861236Pseudomonas mendocina ymp, complete genomeglycosyl transferase, group 18e-0962
NC_007760:4911181:4921853492185349230431191Anaeromyxobacter dehalogenans 2CP-C, complete genomeglycosyl transferase, group 17e-0962
NC_003901:1386000:1403513140351314047661254Methanosarcina mazei Go1, complete genomeglycosyltransferase1e-0861.6
NC_009656:1994392:2023368202336820246211254Pseudomonas aeruginosa PA7 chromosome, complete genomeglycosyltransferase1e-0861.2
NC_010067:807129:8096978096978109201224Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-0861.2
NC_011745:2302979:2333475233347523346981224Escherichia coli ED1a chromosome, complete genomeputative glycosyl transferase1e-0861.2
NC_008554:956003:9765809765809779531374Syntrophobacter fumaroxidans MPOB, complete genomeglycosyl transferase, group 12e-0860.8
NC_008253:2134110:2162363216236321635861224Escherichia coli 536, complete genomeputative colanic acid biosynthesis glycosyl transferase WcaI2e-0860.8
NC_014910:755192:7867947867947880111218Alicycliphilus denitrificans BC chromosome, complete genomeglycosyl transferase group 12e-0860.8
NC_012731:3500545:3529235352923535304491215Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative glycosyl transferase2e-0860.5
NC_009615:644757:6733226733226745271206Parabacteroides distasonis ATCC 8503 chromosome, complete genomeglycosyl transferase family protein2e-0860.5
CU928160:2155947:2185666218566621868891224Escherichia coli IAI1 chromosome, complete genomeputative glycosyl transferase3e-0860.1
NC_011741:2155947:2185666218566621868891224Escherichia coli IAI1 chromosome, complete genomeputative glycosyl transferase3e-0860.1
NC_011751:2395882:2423331242333124245541224Escherichia coli UMN026 chromosome, complete genomeputative glycosyl transferase3e-0860.1
CP002185:2233732:2262420226242022636431224Escherichia coli W, complete genomepredicted glycosyl transferase3e-0860.1
NC_008027:1559083:1579174157917415803971224Pseudomonas entomophila L48, complete genomeglycosyltransferase (group 1)3e-0860.1
NC_012914:469117:4784244784244796831260Paenibacillus sp. JDR-2, complete genomeglycosyl transferase group 15e-0859.3
NC_006905:2175361:2202413220241322036361224Salmonella enterica subsp. enterica serovar Choleraesuis strputative glycosyl transferase in colanic acid biosynthesis5e-0859.3
NC_015572:427732:4342054342054354371233Methylomonas methanica MC09 chromosome, complete genomegroup 1 glycosyl transferase6e-0858.9
NC_013202:59278:8101081010822601251Halomicrobium mukohataei DSM 12286, complete genomeglycosyl transferase group 12e-0757.4
NC_014100:533322:5396255396255409411317Caulobacter segnis ATCC 21756 chromosome, complete genomegroup 1 glycosyl transferase4e-0756.2
NC_009464:1479174:150652915065291507140612Uncultured methanogenic archaeon RC-I, complete genomehypothetical protein5e-0756.2
NC_006347:2154906:2173984217398421751951212Bacteroides fragilis YCH46, complete genomeputative glycosyltransferase1e-0655.1
NC_009138:1138917:1163264116326411644961233Herminiimonas arsenicoxydans, complete genomeconserved hypothetical protein; putative glycosyltransferase9e-0755.1
NC_009654:894492:8944928944928956671176Marinomonas sp. MWYL1, complete genomeglycosyl transferase group 19e-0755.1
NC_014640:6745873:6766550676655067677881239Achromobacter xylosoxidans A8 chromosome, complete genomeglycosyl transferase group 13e-0653.5
NC_013282:2827757:2858904285890428601271224Cronobacter turicensis, complete genomePutative colanic acid biosynthesis glycosyl transferase wcaI3e-0653.1
NC_019977:1456366:1471674147167414728281155Methanomethylovorans hollandica DSM 15978, complete genomeglycosyltransferase6e-0652.4