Pre_GI: BLASTP Hits

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Query: NC_004578:6089958:6115993 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 6115993, End: 6116622, Length: 630

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018000:2543500:254849425484942549129636Sinorhizobium fredii USDA 257 chromosome, complete genomeFMN-dependent NADH-azoreductase 93e-38158
NC_015379:4282815:428599542859954286639645Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,FMN-dependent NADH-azoreductase1e-37156
NC_020409:437781:448651448651449265615Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeFMN-dependent NADH-azoreductase3e-26118
NC_020211:4598217:461718646171864617794609Serratia marcescens WW4, complete genomeputative acyl carrier protein phosphodiesterase2e-1892.4
NC_015381:2859000:288756328875632888171609Burkholderia gladioli BSR3 chromosome 1, complete sequenceputative acyl carrier protein phosphodiesterase6e-1890.9
NC_008061:2106848:213499721349972135641645Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence(Acyl-carrier protein) phosphodiesterase2e-1685.9
NC_008543:127675:134130134130134774645Burkholderia cenocepacia HI2424 chromosome 2, complete sequence(Acyl-carrier-protein) phosphodiesterase2e-1685.9
NC_012587:1203103:121943612194361220056621Rhizobium sp. NGR234, complete genomeputative acyl carrier protein phosphodiesterase4e-1684.7
NC_010125:3854957:385842438584243859029606Gluconacetobacter diazotrophicus PAl 5, complete genomeputative acyl carrier protein phosphodiesterase7e-1684
NC_014815:841484:894461894461895108648Micromonospora sp. L5 chromosome, complete genomenad(p)h dehydrogenase (quinone)1e-1583.2
NC_011071:2207385:220738522073852207993609Stenotrophomonas maltophilia R551-3, complete genomeNAD(P)H dehydrogenase (quinone)1e-1582.8
NC_010814:1441327:148777014877701488402633Geobacter lovleyi SZ, complete genomeNAD(P)H dehydrogenase (quinone)2e-1479.3
NC_009512:1518113:152276815227681523382615Pseudomonas putida F1, complete genomeNAD(P)H dehydrogenase (quinone)5e-1477.8
NC_015379:4630367:464776746477674648387621Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,FMN-dependent NADH-azoreductase5e-1477.8
NC_015589:3085442:309432130943213094949629Desulfotomaculum ruminis DSM 2154 chromosome, complete genome1e-1376.3
NC_014500:3744705:374503737450373745660624Dickeya dadantii 3937 chromosome, complete genomeFMN-dependent NADH-azoreductase1e-1273.2
NC_013892:2332319:235222723522272352841615Xenorhabdus bovienii SS-2004 chromosome, complete genomeNADH-azoreductase, FMN-dependent1e-1273.2
NC_016010:1822212:182542318254231826007585Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeacyl carrier protein phosphodiesterase2e-1272.4
NC_015690:6521740:652908865290886529720633Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAzoR4e-1271.2
NC_012917:3378759:337908533790853379714630Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeNAD(P)H dehydrogenase (quinone)5e-1271.2
NC_015064:2421034:244853324485332449156624Acidobacterium sp. MP5ACTX9 chromosome, complete genomeNAD(P)H dehydrogenase (quinone)8e-1270.5
NC_014817:142976:165222165222165833612Asticcacaulis excentricus CB 48 chromosome 2, complete sequencenad(p)h dehydrogenase (quinone)2e-1169.3
NC_016023:915178:934716934716935339624Bacillus coagulans 36D1 chromosome, complete genomeNAD(P)H dehydrogenase (quinone)3e-1168.6
NC_011094:1683979:170617717061771706782606Salmonella enterica subsp. enterica serovar Schwarzengrund strazoreductase4e-1168.2
NC_011080:1709612:173179017317901732395606Salmonella enterica subsp. enterica serovar Newport str. SL254,fmn-dependent NADH-azoreductase4e-1168.2
NC_004631:1587000:160292516029251603530606Salmonella enterica subsp. enterica serovar Typhi Ty2, completeacyl carrier protein phosphodiesterase4e-1168.2
NC_003197:1713259:173543717354371736042606Salmonella typhimurium LT2, complete genomeacyl carrier protein phosphodiesterase4e-1168.2
NC_011083:1761352:178354017835401784145606Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,fmn-dependent NADH-azoreductase4e-1168.2
NC_006905:1726416:174859317485931749198606Salmonella enterica subsp. enterica serovar Choleraesuis stracyl carrier protein phosphodiesterase4e-1168.2
NC_011149:1429523:147111014711101471715606Salmonella enterica subsp. enterica serovar Agona str. SL483,fmn-dependent NADH-azoreductase4e-1168.2
NC_015761:1599000:161848116184811619086606Salmonella bongori NCTC 12419, complete genomeACP phosphodiesterase4e-1168.2
NC_016810:1670112:169229016922901692895606Salmonella enterica subsp. enterica serovar Typhimurium strAcyl carrier protein phosphodiesterase4e-1168.2
NC_016831:1468691:149087214908721491477606Salmonella enterica subsp. enterica serovar Gallinarum/pullorumacyl carrier protein phosphodiesterase4e-1168.2
NC_016832:1582273:159987515998751600480606Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,FMN-dependent NADH-azoreductase4e-1168.2
NC_016856:1723236:174541417454141746019606Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sazoreductase4e-1168.2
NC_016857:1670112:169229016922901692895606Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74azoreductase4e-1168.2
NC_016860:1710950:173312817331281733733606Salmonella enterica subsp. enterica serovar Typhimurium strazoreductase4e-1168.2
NC_016863:1671428:169360616936061694211606Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1azoreductase4e-1168.2
NC_017046:1669995:169217316921731692778606Salmonella enterica subsp. enterica serovar Typhimurium str. 798Acyl carrier protein phosphodiesterase4e-1168.2
NC_011894:6731115:673155967315596732176618Methylobacterium nodulans ORS 2060, complete genomeNAD(P)H dehydrogenase (quinone)3e-1168.2
NC_014652:1803000:180302218030221803627606Caldicellulosiruptor hydrothermalis 108 chromosome, completenad(p)h dehydrogenase (quinone)7e-1167.4
NC_013203:1406158:1422218142221814239061689Atopobium parvulum DSM 20469, complete genomeNAD(P)H dehydrogenase (quinone)1e-1066.2
NC_014963:3942363:394842039484203949037618Terriglobus saanensis SP1PR4 chromosome, complete genomeNAD(P)H dehydrogenase (quinone)5e-1064.3
NC_003888:32134:368163681637478663Streptomyces coelicolor A3(2), complete genomehydrolase6e-1064.3
NC_015634:359500:410833410833411453621Bacillus coagulans 2-6 chromosome, complete genomeNAD(P)H dehydrogenase (quinone)6e-1063.9
NC_011146:2916223:293183329318332932465633Geobacter bemidjiensis Bem, complete genomeNAD(P)H dehydrogenase (quinone)1e-0963.2
NC_020272:20435:268882688827529642Bacillus amyloliquefaciens IT-45, complete genomeNAD(P)H dehydrogenase (quinone)5e-0960.8
NC_007802:1991211:202354020235402024154615Jannaschia sp. CCS1, complete genome(Acyl-carrier protein) phosphodiesterase7e-0960.5
NC_017188:461177:479030479030479680651Bacillus amyloliquefaciens TA208 chromosome, complete genomeFMN-dependent NADH-azoreductase 17e-0960.5
NC_017191:467207:485052485052485702651Bacillus amyloliquefaciens XH7 chromosome, complete genomeFMN-dependent NADH-azoreductase 17e-0960.5
NC_007509:1043602:105875810587581059390633Burkholderia sp. 383 chromosome 3, complete sequenceAcyl-carrier protein phosphodiesterase9e-0960.1
NC_008570:4009762:401608340160834016682600Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeacyl carrier protein phosphodiesterase1e-0860.1
NC_017506:1507943:151523515152351515954720Marinobacter adhaerens HP15 chromosome, complete genomeNAD(P)H dehydrogenase (quinone)1e-0859.7
NC_014211:174694:177215177215177916702Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 plasmidNAD(P)H dehydrogenase (quinone)2e-0859.3
NC_009254:442360:454429454429455046618Burkholderia vietnamiensis G4 chromosome 3, complete sequenceACP phosphodiesterase2e-0859.3
NC_017190:466236:477302477302477952651Bacillus amyloliquefaciens LL3 chromosome, complete genomeacyl carrier protein phosphodiesterase 3; NAD(P)H dehydrogenase2e-0859.3
NC_014551:483773:491378491378492028651Bacillus amyloliquefaciens DSM 7, complete genomeacyl carrier protein phosphodiesterase 3; NAD(P)H dehydrogenase2e-0859.3
NC_015376:3320818:334263333426333343250618Burkholderia gladioli BSR3 chromosome chromosome 2, completeAcyl-carrier-protein phosphodiesterase2e-0858.9
NC_020063:1051310:105661510566151057250636Enterobacteriaceae bacterium strain FGI 57, complete genomeacyl carrier protein phosphodiesterase1e-0757
NC_016642:2440070:246175324617532462421669Pseudovibrio sp. FO-BEG1 chromosome, complete genomeNAD(P)H dehydrogenase (quinone)4e-0754.7
NC_009659:1050532:109328210932821093905624Janthinobacterium sp. Marseille chromosome, complete genomeACP phosphodieterase8e-0753.9
NC_013929:5097389:509786750978675098520654Streptomyces scabiei 87.22 chromosome, complete genomedehydrogenase flavoprotein2e-0652.8
NC_006512:1722138:172615117261511726873723Idiomarina loihiensis L2TR, complete genomeAcyl carrier protein phosphodiesterase2e-0652.8
NC_012997:2254000:227734622773462278050705Teredinibacter turnerae T7901, complete genomeFMN-dependent NADH-azoreductase 24e-0651.6
NC_016628:1:143611436114978618Vibrio furnissii NCTC 11218 chromosome 2, complete sequence(Acyl-carrier-protein) phosphodiesterase/NAD(P)H dehydrogenase (quinone)5e-0650.8
NC_011001:372185:396236396236396835600Burkholderia cenocepacia J2315 chromosome 2, complete sequenceFMN-dependent NADH-azoreductase7e-0650.8
NC_016605:50695:543415434154973633Pediococcus claussenii ATCC BAA-344 chromosome, complete genomeNADPH-dependent FMN reductase family protein9e-0650.4