Pre_GI: BLASTP Hits

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Query: NC_004578:6089958:6107632 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 6107632, End: 6107955, Length: 324

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005126:1223042:124191812419181242235318Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein2e-1994.4
NC_008149:3251196:326880332688033269120318Yersinia pestis Nepal516, complete genomeprophage protein3e-1994
NC_008150:650899:651490651490651807318Yersinia pestis Antiqua, complete genomeputative prophage protein3e-1994
NC_009381:2939782:295738829573882957705318Yersinia pestis Pestoides F chromosome, complete genomeprophage protein3e-1994
NC_017168:4155143:415677041567704157087318Yersinia pestis A1122 chromosome, complete genomeprophage protein3e-1994
NC_021150:3667176:367921836792183679553336Azotobacter vinelandii CA6, complete genomehypothetical protein2e-1994
NC_012560:3667177:367921936792193679554336Azotobacter vinelandii DJ, complete genomehypothetical protein2e-1994
NC_017265:1136000:113608111360811136401321Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative addiction module killer protein3e-1993.6
NC_005810:1130251:114785811478581148178321Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein3e-1993.6
NC_019697:1879769:190086519008651901218354Chamaesiphon minutus PCC 6605, complete genomeputative addiction module killer protein5e-1993.2
NC_012917:3378759:338578733857873386110324Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeaddiction module killer protein2e-1890.9
NC_008782:3110744:312731231273123127662351Acidovorax sp. JS42, complete genomeprotein of unknown function DUF8917e-1889.4
NC_014365:2888897:289678328967832897121339Desulfarculus baarsii DSM 2075 chromosome, complete genomeaddiction module killer protein1e-1788.6
NC_014910:242845:278244278244278573330Alicycliphilus denitrificans BC chromosome, complete genomeaddiction module killer protein2e-1787.4
NC_013959:2801557:281473728147372815060324Sideroxydans lithotrophicus ES-1 chromosome, complete genomeaddiction module killer protein3e-1787
NC_017033:1052000:107205810720581072372315Frateuria aurantia DSM 6220 chromosome, complete genomeputative addiction module killer protein3e-1787
NC_007517:2870657:287565328756532875943291Geobacter metallireducens GS-15, complete genomeprotein of unknown function DUF8913e-1787
NC_014836:155924:177911177911178237327Desulfurispirillum indicum S5 chromosome, complete genomeaddiction module killer protein1e-1685.1
NC_009337:715500:762264762264762569306Chlorobium phaeovibrioides DSM 265 chromosome, complete genomehypothetical protein2e-1684.3
NC_014973:54449:650356503565325291Geobacter sp. M18 chromosome, complete genomeaddiction module killer protein3e-1684
NC_009655:1357486:136660113666011366918318Actinobacillus succinogenes 130Z chromosome, complete genomeaddiction module killer protein3e-1683.6
NC_008751:1736512:174567017456701745984315Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeprotein of unknown function DUF8914e-1683.2
NC_010943:325739:337553337553337840288Stenotrophomonas maltophilia K279a, complete genomeputative phage-related protein1e-1581.6
NC_009337:715500:757213757213757560348Chlorobium phaeovibrioides DSM 265 chromosome, complete genomehypothetical protein2e-1581.3
NC_007512:2024880:204919220491922049539348Pelodictyon luteolum DSM 273, complete genomehypothetical protein2e-1580.9
NC_008740:2989856:299716629971662997465300Marinobacter aquaeolei VT8, complete genomeprotein of unknown function DUF8913e-1580.5
NC_005230:32647:361893618936479291Synechocystis sp. PCC 6803 plasmid pSYSA, complete sequencehypothetical protein4e-1580.1
NC_014228:2883500:288453628845362884823288Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein9e-1579
NC_003143:1233128:123475212347521235063312Yersinia pestis CO92, complete genomeputative prophage protein7e-1475.9
NC_013416:939668:942292942292942603312Aggregatibacter actinomycetemcomitans D11S-1, complete genomeaddiction module killer protein9e-1475.5
NC_009656:4527457:460252546025254602824300Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein2e-1374.3
NC_014394:1373602:140626614062661406625360Gallionella capsiferriformans ES-2 chromosome, complete genomeaddiction module killer protein4e-1373.6
NC_012751:1988280:200321020032102003506297Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeaddiction module4e-1373.6
NC_015731:2148517:216379221637922164130339Nitrosomonas sp. Is79A3 chromosome, complete genomeaddiction module killer protein9e-1372.4
NC_020829:5620826:562446156244615624763303Pseudomonas denitrificans ATCC 13867, complete genomeaddiction module killer protein9e-1372.4
NC_014228:2270000:229130322913032291659357Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein8e-1372.4
NC_009925:1003000:101123410112341011518285Acaryochloris marina MBIC11017, complete genomeaddiction module toxin, putative7e-1372.4
NC_011365:592256:638299638299638598300Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeaddiction module killer protein1e-1272
NC_006513:3486558:348995834899583490182225Azoarcus sp. EbN1, complete genomehypothetical prophage protein4e-1167
NC_014246:1402500:143441714344171434725309Mobiluncus curtisii ATCC 43063 chromosome, complete genomeaddiction module killer protein3e-1063.9
NC_007275:1:415441544453300Pseudomonas syringae pv. phaseolicola 1448A small plasmid, completehypothetical protein1e-0962
NC_006513:3486558:349276834927683492992225Azoarcus sp. EbN1, complete genomehypothetical protein1e-0962
NC_011146:3089297:310020831002083100504297Geobacter bemidjiensis Bem, complete genome6e-0959.7
NC_016830:2247789:226251922625192262689171Pseudomonas fluorescens F113 chromosome, complete genomeaddiction module killer protein1e-0858.9
NC_016043:471719:487327487327487644318Taylorella asinigenitalis MCE3 chromosome, complete genomehypothetical protein5e-0650.1