Pre_GI: BLASTP Hits

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Query: NC_004578:3193490:3219975 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 3219975, End: 3220970, Length: 996

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_000913:272071:300155300155301111957Escherichia coli K12, complete genomepredicted oxidoreductase with FAD-binding domain3e-123441
AC_000091:273325:300155300155301111957Escherichia coli W3110 DNA, complete genomepredicted oxidoreductase with FAD-binding domain3e-123441
NC_013361:313540:337558337558338514957Escherichia coli O26:H11 str. 11368 chromosome, complete genomeoxidoreductase3e-123441
NC_011415:308825:331871331871332827957Escherichia coli SE11 chromosome, complete genomeputative oxidoreductase3e-123441
CU928145:299080:315323315323316279957Escherichia coli 55989 chromosome, complete genomeputative oxidoreductase with FAD-binding domain3e-123441
NC_011748:299080:315323315323316279957Escherichia coli 55989, complete genomeputative oxidoreductase with FAD-binding domain3e-123441
NC_012947:3487392:351031035103103511266957Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completemolybdopterin dehydrogenase FAD-binding4e-123441
NC_011757:1146608:114838111483811149331951Methylobacterium chloromethanicum CM4, complete genomemolybdopterin dehydrogenase FAD-binding3e-120431
NC_020063:2230000:224740922474092248359951Enterobacteriaceae bacterium strain FGI 57, complete genomeaerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein2e-117422
NC_015976:2900891:291718829171882918138951Sphingobium sp. SYK-6, complete genomeputative oxidoreductase2e-116419
NC_015593:2103815:212584121258412126791951Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeXanthine dehydrogenase1e-112406
NC_015947:2231493:225188622518862252836951Burkholderia sp. JV3 chromosome, complete genomexanthine dehydrogenase3e-112405
NC_009512:2782000:2784231278423127852321002Pseudomonas putida F1, complete genomemolybdopterin dehydrogenase, FAD-binding8e-81300
NC_011770:3735162:375524437552443756233990Pseudomonas aeruginosa LESB58, complete genomeputative hydroxylase molybdopterin-containing subunit7e-80297
NC_002516:2113186:211220021122002113189990Pseudomonas aeruginosa PAO1, complete genomeprobable hydroxylase molybdopterin-containing subunit7e-80297
NC_008463:3503576:351920635192063520195990Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative hydroxylase molybdopterin-containing subunit7e-80297
NC_013159:2913927:293027729302772931269993Saccharomonospora viridis DSM 43017, complete genomeaerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein8e-78290
NC_007778:5079500:510018351001835101169987Rhodopseudomonas palustris HaA2, complete genomeMolybdopterin dehydrogenase, FAD-binding6e-77287
NC_012791:4007780:402646940264694027461993Variovorax paradoxus S110 chromosome 1, complete genomemolybdopterin dehydrogenase FAD-binding8e-77287
NC_008571:505776:512043512043513029987Gramella forsetii KT0803, complete genomemolybdenum-dependent oxidoreductase FAD-binding subunit3e-73275
NC_017186:3947874:395136539513653952360996Amycolatopsis mediterranei S699 chromosome, complete genomecarbon-monoxide dehydrogenase medium subunit5e-72271
NC_014318:3947845:395133639513363952331996Amycolatopsis mediterranei U32 chromosome, complete genomecarbon-monoxide dehydrogenase medium subunit5e-72271
NC_014041:3229867:323799432379943238980987Zunongwangia profunda SM-A87 chromosome, complete genomemolybdenum-dependent oxidoreductase FAD-binding subunit7e-72271
NC_006677:1596560:1637338163733816383451008Gluconobacter oxydans 621H, complete genomePutative oxidoreductase1e-71270
NC_007412:147757:156539156539157531993Anabaena variabilis ATCC 29413 plasmid C, complete sequenceMolybdopterin dehydrogenase, FAD-binding4e-71268
NC_020054:3132478:3135383313538331364021020Fibrella aestuarina BUZ 2 drat genomemolybdopterin dehydrogenase FAD-binding protein5e-67254
NC_013956:4627890:465034946503494651341993Pantoea ananatis LMG 20103 chromosome, complete genomeYagS2e-53209
NC_006138:1921424:193945919394591940436978Desulfotalea psychrophila LSv54, complete genomeoxidoreductase (molybdopterin binding subunit)3e-31136
NC_014210:2638773:266667426666742667663990Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,molybdopterin dehydrogenase FAD-binding protein2e-1790.5
NC_009801:3175714:320625632062563207134879Escherichia coli E24377A, complete genomexanthine dehydrogenase, FAD-binding subunit8e-1478.2
AC_000091:2976293:300127030012703002148879Escherichia coli W3110 DNA, complete genomexanthine dehydrogenase, FAD-binding subunit1e-1377.4
CP002185:3167738:319966331996633200541879Escherichia coli W, complete genomexanthine dehydrogenase, FAD-binding subunit1e-1377.4
CP002516:903241:905535905535906413879Escherichia coli KO11, complete genomemolybdopterin dehydrogenase FAD-binding protein1e-1377.4
NC_011748:3196173:322675532267553227633879Escherichia coli 55989, complete genomexanthine dehydrogenase subunit XdhB1e-1377.4
NC_010473:3069529:309450630945063095384879Escherichia coli str. K-12 substr. DH10B, complete genomexanthine dehydrogenase, FAD-binding subunit1e-1377.4
NC_000913:2975659:300063630006363001514879Escherichia coli K12, complete genomexanthine dehydrogenase, FAD-binding subunit1e-1377.4
AP010958:3474077:351022935102293511107879Escherichia coli O103:H2 str. 12009 DNA, complete genomexanthine dehydrogenase, FAD-binding subunit1e-1377.4
CU928145:3196173:322675532267553227633879Escherichia coli 55989 chromosome, complete genomexanthine dehydrogenase, FAD-binding subunit1e-1377.4
CU928160:3030324:306087030608703061748879Escherichia coli IAI1 chromosome, complete genomexanthine dehydrogenase, FAD-binding subunit1e-1377.4
NC_016902:903241:905535905535906413879Escherichia coli KO11FL chromosome, complete genomemolybdopterin dehydrogenase FAD-binding protein1e-1377.4
NC_013364:3552284:358283935828393583717879Escherichia coli O111:H- str. 11128, complete genomexanthine dehydrogenase, FAD-binding subunit1e-1377.4
NC_013353:3474077:351022935102293511107879Escherichia coli O103:H2 str. 12009, complete genomexanthine dehydrogenase, FAD-binding subunit1e-1377.4
NC_012759:2862807:288778428877842888662879Escherichia coli BW2952 chromosome, complete genomexanthine dehydrogenase subunit XdhB1e-1377.4
NC_011741:3030324:306087030608703061748879Escherichia coli IAI1 chromosome, complete genomexanthine dehydrogenase subunit XdhB1e-1377.4
NC_011415:3217796:324834032483403249218879Escherichia coli SE11 chromosome, complete genomexanthine dehydrogenase subunit XdhB1e-1377.4
NC_010468:906957:909251909251910129879Escherichia coli ATCC 8739, complete genomemolybdopterin dehydrogenase FAD-binding1e-1377.4
NC_007384:3151344:317230931723093173187879Shigella sonnei Ss046, complete genomeputative dehydrogenase3e-1376.3
NC_002695:3702344:374094537409453741823879Escherichia coli O157:H7 str. Sakai, complete genomeputative dehydrogenase5e-1375.5
NC_011353:3805819:384534238453423846220879Escherichia coli O157:H7 str. EC4115 chromosome, complete genomexanthine dehydrogenase subunit XdhB5e-1375.5
NC_013008:3761467:380006838000683800946879Escherichia coli O157:H7 str. TW14359 chromosome, complete genomexanthine dehydrogenase subunit XdhB5e-1375.5
NC_013941:3540420:356494935649493565827879Escherichia coli O55:H7 str. CB9615 chromosome, complete genomexanthine dehydrogenase FAD-binding subunit5e-1375.5
NC_011751:3285646:332517333251733326051879Escherichia coli UMN026 chromosome, complete genomexanthine dehydrogenase subunit XdhB5e-1375.5
NC_011750:3407500:342990034299003430778879Escherichia coli IAI39 chromosome, complete genomexanthine dehydrogenase subunit XdhB1e-1273.9
NC_002655:3769643:380825138082513809129879Escherichia coli O157:H7 EDL933, complete genomeputative dehydrogenase2e-1273.6
NC_012589:2605085:261461826146182615466849Sulfolobus islandicus L.S.2.15, complete genomemolybdopterin dehydrogenase FAD-binding3e-1169.7
NC_012622:2571812:258342925834292584277849Sulfolobus islandicus Y.G.57.14 chromosome, complete genomemolybdopterin dehydrogenase FAD-binding3e-1169.7
NC_012623:2680601:269013326901332690981849Sulfolobus islandicus Y.N.15.51 chromosome, complete genomemolybdopterin dehydrogenase FAD-binding3e-1169.7
NC_012726:2461102:247231724723172473165849Sulfolobus islandicus M.16.4 chromosome, complete genomemolybdopterin dehydrogenase FAD-binding3e-1169.7
NC_012588:2483000:249192324919232492771849Sulfolobus islandicus M.14.25 chromosome, complete genomemolybdopterin dehydrogenase FAD-binding3e-1169.7
NC_012632:2564801:257601625760162576864849Sulfolobus islandicus M.16.27 chromosome, complete genomemolybdopterin dehydrogenase FAD-binding3e-1169.7
NC_010511:637214:657815657815658681867Methylobacterium sp. 4-46 chromosome, complete genomeFAD-binding molybdopterin dehydrogenase4e-1169.3
NC_016584:432610:435659435659436525867Desulfosporosinus orientis DSM 765 chromosome, complete genomeaerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein7e-1168.6
NC_013769:2591065:260059826005982601446849Sulfolobus islandicus L.D.8.5 chromosome, complete genomemolybdopterin dehydrogenase, FAD-binding protein6e-1168.6
NC_009922:944538:958973958973959827855Alkaliphilus oremlandii OhILAs, complete genomemolybdopterin dehydrogenase FAD-binding1e-1067.4
NC_017276:2391645:240286024028602403708849Sulfolobus islandicus REY15A chromosome, complete genomemolybdopterin dehydrogenase FAD-binding protein2e-1067
NC_017275:2519637:253085225308522531700849Sulfolobus islandicus HVE10/4 chromosome, complete genomemolybdopterin dehydrogenase FAD-binding protein2e-1067
NC_009633:712500:721271721271722125855Alkaliphilus metalliredigens QYMF chromosome, complete genomeFAD-binding molybdopterin dehydrogenase4e-1065.9
NC_002927:383760:402279402279403148870Bordetella bronchiseptica RB50, complete genomemolybdopterin dehydrogenase4e-1065.9
NC_015563:3203012:323374732337473234643897Delftia sp. Cs1-4 chromosome, complete genomecarbon-monoxide dehydrogenase5e-1065.5
NC_002754:2391867:239955223995522400400849Sulfolobus solfataricus P2, complete genomeCarbon monoxide dehydrogenase, medium chain. (cutB-2)1e-0964.7
NC_012622:786554:794890794890795777888Sulfolobus islandicus Y.G.57.14 chromosome, complete genomemolybdopterin dehydrogenase FAD-binding2e-0963.5
NC_020210:1275031:135067513506751351553879Geobacillus sp. GHH01, complete genomemolybdopterin dehydrogenase FAD-binding protein1e-0860.8
NC_014098:2332938:235990023599002360712813Bacillus tusciae DSM 2912 chromosome, complete genomemolybdopterin dehydrogenase FAD-binding protein1e-0860.8
NC_014831:1763408:177744317774431778345903Thermaerobacter marianensis DSM 12885 chromosome, complete genomemolybdopterin dehydrogenase FAD-binding protein5e-0858.9
NC_015422:4508028:452353745235374524415879Alicycliphilus denitrificans K601 chromosome, complete genomecarbon-monoxide dehydrogenase1e-0757.4
NC_017955:2327500:234863723486372349491855Modestobacter marinus, complete genomeXanthine dehydrogenase FAD-binding subunit2e-0756.6