Pre_GI: BLASTP Hits

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Query: NC_004547:2810151:2828802 Erwinia carotovora subsp. atroseptica SCRI1043, complete genome

Start: 2828802, End: 2829785, Length: 984

Host Lineage: Pectobacterium atrosepticum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (ATCC BAA-672) is a virulent blackleg isolated from the stem of a potato plant. Causative agent for blackleg and soft rot disease in potatoes. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Both Pectobacterium chrysanthemia and Pectobacterium carotovora cause soft-rot diseases of various plant hosts through degradation of the plant cell walls. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium. Pectobacterium atrosepticum is an environmentally widespread organism that causes blackleg and soft rot disease in potatoes. This organism produces pectolytic enzymes that destroy plant tissue and allow the bacteria to spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017168:3433804:343380434338043434775972Yersinia pestis A1122 chromosome, complete genometRNA mo(5)U34 methyltransferase2e-158558
NC_003143:2309500:232721023272102328181972Yersinia pestis CO92, complete genomehypothetical protein2e-158558
NC_008150:1593500:161152316115231612494972Yersinia pestis Antiqua, complete genomehypothetical protein2e-158558
NC_004088:2491303:249130324913032492274972Yersinia pestis KIM, complete genomeenzyme2e-158558
NC_009381:1205900:120590012059001206871972Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein2e-158558
NC_014029:2285323:228532322853232286294972Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-158558
NC_017160:2212806:221280622128062213777972Yersinia pestis D182038 chromosome, complete genomehypothetical protein2e-158558
NC_010465:2383219:238321923832192384190972Yersinia pseudotuberculosis YPIII, complete genomemethyltransferase5e-158556
NC_010634:2297000:231407323140732315044972Yersinia pseudotuberculosis PB1/+, complete genomemethyltransferase2e-157555
NC_006155:2378526:239617723961772397148972Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein2e-157555
NC_008258:1934479:195271519527151953686972Shigella flexneri 5 str. 8401, complete genomeputative enzyme3e-148524
NC_007384:1320287:132527313252731326244972Shigella sonnei Ss046, complete genomeputative enzyme3e-148524
NC_016822:1304398:130811713081171309088972Shigella sonnei 53G, complete genometRNA mo(5)U34 methyltransferase3e-148524
NC_011415:2153243:216932721693272170298972Escherichia coli SE11 chromosome, complete genomehypothetical protein6e-148523
NC_003910:2175305:219715821971582198126969Colwellia psychrerythraea 34H, complete genomeputative methyltransferase3e-112405
NC_007645:2294553:231035923103592311333975Hahella chejuensis KCTC 2396, complete genomeSAM-dependent methyltransferase2e-95348
NC_014973:54449:728067280673777972Geobacter sp. M18 chromosome, complete genomemethyltransferase1e-92340
NC_012560:1322000:134496113449611345920960Azotobacter vinelandii DJ, complete genomemethyltransferase1e-92339
NC_021150:1322000:134497313449731345932960Azotobacter vinelandii CA6, complete genomemethyltransferase1e-92339
NC_007517:2870657:287375528737552874726972Geobacter metallireducens GS-15, complete genomeMethyltransferase, putative6e-90330
NC_013851:859396:859396859396860373978Allochromatium vinosum DSM 180 chromosome, complete genomemethyltransferase5e-87321