Pre_GI: BLASTP Hits

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Query: NC_004432:32500:37157 Mycoplasma penetrans HF-2, complete genome

Start: 37157, End: 38092, Length: 936

Host Lineage: Mycoplasma penetrans; Mycoplasma; Mycoplasmataceae; Mycoplasmatales; Tenericutes; Bacteria

General Information: This strain has been isolated from the tracheal aspirate of a previously healthy HIV-negative patient with severe respiratory symptoms caused by this infection. Causes urogenital and respiratory disease. This genus currently comprises more than 120 obligate parasitic species found in a wide spectrum of hosts, including humans, animals, insects and plants. The primary habitats of human and animal mycoplasmas are mucous membranes of the respiratory and urogenital tracts, eyes, mammary glands and the joints. Infection that proceeds through attachment of the bacteria to the host cell via specialized surface proteins, adhesins, and subsequent invasion, results in prolonged intracellular persistence that may cause lethality. Once detected in association with their eukaryotic host tissue, most mycoplasmas can be cultivated in the absence of a host if their extremely fastidious growth requirements are met. The latter is one of the major traits that puts them in the separate taxonomic group of microorganisms, class Mollicutes. The cell membrane is rich in protein components (up to two thirds of the membrane mass) that largely consists of highly structurally adaptive lipoproteins employed in invading the host immune system, attachment to the host cells, and pathogenic invasion. Cell division proceeds via normal binary fission or via elongation of a parental cell to form multinucleated filaments and the subsequent breakup to form coccoid bodies.Mycoplasmas carry the smallest genomes of self-replicating cells (less than 500 recognizable coding regions), which is one of the reasons they were among the first microorganisms selected for the genome-sequencing projects. During their evolution, mycoplasmas appear to have lost all of the genes involved in amino acid and cofactor biosynthesis, synthesis of the cell wall and lipid metabolism, resulting in a requirement for the full spectrum of substrates and cofactors taken up from the host or from the complex artificial culture medium. They have lost a number of genes involved in cellular processes, such as cell division, heat shock response, regulatory genes, the two-component signal transduction systems, histidine protein kinases or their target response regulators, and most transcription factors. The majority of mycoplasmas are deficient in genes coding for components of intermediary and energy metabolism and thus are dependent mostly on glycolysis as an ATP-generating pathway. This organism infects humans in the urogenital and respiratory tracts though invasion of tissues. The disease is mainly associated with HIV-1 infection, particularly in the homosexual population, and is very persistent and believed to contribute to the deterioration of the immune system during HIV. Mycoplasma penetrans infection has also been suggested to be a primary cause of some forms of human urethritis and respiratory disease in non-HIV individuals.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014364:667841:7201797201797212311053Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeglycosyl transferase family 24e-1168.9
NC_003366:613798:6263876263876274331047Clostridium perfringens str. 13, complete genomespore coat polysaccharide biosynthesis protein5e-1168.6
NC_015738:978794:100780110078011008790990Eggerthella sp. YY7918, complete genomehypothetical protein3e-1066.2
NC_020207:843822:854494854494855450957Enterococcus faecium NRRL B-2354, complete genomeputative glycosyltransferase7e-1064.7
NC_012778:137064:1570021570021580121011Eubacterium eligens ATCC 27750, complete genomehypothetical protein9e-1064.7
NC_015738:978794:1003411100341110044631053Eggerthella sp. YY7918, complete genomehypothetical protein1e-0963.9
NC_014364:667841:7212497212497223011053Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeglycosyl transferase family 22e-0963.9
NC_015571:411156:418988418988419974987Porphyromonas gingivalis TDC60, complete genomeputative glycosyltransferase3e-0963.2
NC_014387:497883:5626765626765636921017Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeglycosyl transferase GT2 family protein4e-0962.4
NC_017068:2436960:2472902247290224742061305Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative glycosyl transferase family 2 protein4e-0962.4
NC_013508:1289159:129810112981011299072972Edwardsiella tarda EIB202, complete genomeglycosyl transferase family 26e-0962
NC_009523:5104413:5124238512423851252481011Roseiflexus sp. RS-1 chromosome, complete genomeglycosyl transferase family protein6e-0962
NC_010729:225616:244252244252245238987Porphyromonas gingivalis ATCC 33277, complete genomeprobable glycosyltransferase7e-0961.6
NC_013714:2086526:2105496210549621065241029Bifidobacterium dentium Bd1, complete genomeGlycosyl transferase, family 21e-0860.8
NC_020291:4903981:490707549070754908055981Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeglycosyl transferase2e-0860.5
NC_004461:1:3303533035353622328Staphylococcus epidermidis ATCC 12228, complete genometeichoic acid biosynthesis protein F2e-0860.5
NC_016047:3632489:3642675364267536461753501Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeglycosyltransferase1e-0860.5
NC_008618:1729739:173986417398641740835972Bifidobacterium adolescentis ATCC 15703, complete genomehypothetical protein2e-0860.1
NC_013410:3280039:331610233161023317058957Fibrobacter succinogenes subsp. succinogenes S85 chromosome,family 2 glycosyl transferase3e-0859.7
NC_015500:2197000:220421222042122205198987Treponema brennaborense DSM 12168 chromosome, complete genomeglycosyl transferase family 23e-0859.7
NC_015275:1573916:1593493159349315946651173Clostridium lentocellum DSM 5427 chromosome, complete genomeglycosyl transferase family 23e-0859.3
NC_015859:370500:3844353844353854781044Corynebacterium variabile DSM 44702 chromosome, complete genomeputative glycosyltransferase4e-0858.9
NC_017214:299637:3176993176993187301032Bifidobacterium animalis subsp. lactis BB-12 chromosome, completeglycosyltransferase6e-0858.5
NC_017215:1605917:1625093162509316261241032Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,Hexosyltransferase6e-0858.5
NC_012814:1599241:1620459162045916214721014Bifidobacterium animalis subsp. lactis Bl-04, complete genomeglycosyltransferase6e-0858.5
NC_012815:1603916:1620177162017716211901014Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeglycosyltransferase6e-0858.5
NC_011835:733320:7513877513877524001014Bifidobacterium animalis subsp. lactis AD011 chromosome, completeglycosyl transferase family protein6e-0858.5
NC_017216:1603000:1620104162010416211171014Bifidobacterium animalis subsp. lactis BLC1, complete genomeglycosyl transferase, family 26e-0858.5
NC_017217:1607679:1625746162574616267591014Bifidobacterium animalis subsp. lactis V9 chromosome, completeglycosyltransferase6e-0858.5
NC_013740:842841:862980862980863954975Acidaminococcus fermentans DSM 20731, complete genomeglycosyl transferase family 29e-0858.2
NC_013714:2086526:210885421088542109843990Bifidobacterium dentium Bd1, complete genomeglycosyl transferase, family 28e-0858.2
NC_006347:2154906:2167716216771621687621047Bacteroides fragilis YCH46, complete genomeputative glycosyltransferase7e-0858.2
NC_011979:1590432:160819716081971609042846Geobacter sp. FRC-32, complete genomeglycosyl transferase family 27e-0858.2
NC_007759:415456:4248554248554259401086Syntrophus aciditrophicus SB, complete genomeglycosyltransferase2e-0757
NC_006624:1494424:150526615052661506237972Thermococcus kodakarensis KOD1, complete genomeglycosyltransferase, family 23e-0756.2
NC_016612:5391706:5396593539659353979121320Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein3e-0756.2
NC_015500:1923514:195021919502191951175957Treponema brennaborense DSM 12168 chromosome, complete genomeglycosyl transferase family 23e-0756.2
NC_008262:784878:8265578265578275611005Clostridium perfringens SM101, complete genomeglycosyl transferase, group 2 family protein domain protein3e-0756.2
NC_015577:1794560:1813311181331118143751065Treponema azotonutricium ZAS-9 chromosome, complete genomeglycosyltransferase4e-0755.5
NC_013714:2294342:230724223072422308084843Bifidobacterium dentium Bd1, complete genomeGlycosyl transferase family 26e-0755.1
NC_007929:67810:8911389113901291017Lactobacillus salivarius subsp. salivarius UCC118, complete genomeN-acetylglucosaminyltransferase6e-0755.1
NC_014622:4517709:451770945177094518425717Paenibacillus polymyxa SC2 chromosome, complete genomeglycosyl transferase family protein7e-0755.1
NC_011899:2481229:248783624878362488588753Halothermothrix orenii H 168, complete genomeglycosyl transferase family 29e-0754.7
NC_016047:3599095:3624161362416136260651905Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeglycosyl transferase family protein8e-0754.7
NC_017200:1690788:169078816907881691588801Bacillus thuringiensis serovar finitimus YBT-020 chromosome,glycosyl transferase family protein8e-0754.7
NC_013410:2519441:2533856253385625349261071Fibrobacter succinogenes subsp. succinogenes S85 chromosome,family 2 glycosyl transferase1e-0654.3
NC_016845:3536886:3544033354403335453491317Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,glycosyl transferase family protein1e-0654.3
NC_020291:4944835:4971113497111349727351623Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeglycosyltransferase, group 2 family protein2e-0653.9
NC_011658:5007691:5027254502725450283151062Bacillus cereus AH187 chromosome, complete genomeN-acetylglucosaminyltransferase2e-0653.9
NC_015663:4950000:4986313498631349873231011Enterobacter aerogenes KCTC 2190 chromosome, complete genomeCapsular polysaccharide biosynthesis protein2e-0653.5
NC_013730:2403930:2425673242567324266801008Spirosoma linguale DSM 74, complete genomeglycosyl transferase family 22e-0653.5
NC_009512:4408325:4420626442062644251554530Pseudomonas putida F1, complete genomeglycosyl transferase, family 23e-0653.1
NC_015172:1621223:1637423163742316394712049Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeglycosyl transferase family 22e-0653.1
NC_008532:973510:982944982944983924981Streptococcus thermophilus LMD-9, complete genomeGlycosyltransferase involved in cell wall biogenesis3e-0652.8
NC_005823:2566588:2569315256931525710631749Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130glycosyl transferase3e-0652.8
NC_004342:1648977:1657834165783416595821749Leptospira interrogans serovar Lai str. 56601 chromosome I,glycosyl transferase3e-0652.8
NC_007929:1637261:1641712164171216427551044Lactobacillus salivarius subsp. salivarius UCC118, complete genomeGlycosyltransferase4e-0652.4
NC_014219:3254268:327264732726473273540894Bacillus selenitireducens MLS10 chromosome, complete genomeglycosyl transferase family 24e-0652.4
NC_009615:2590207:259965725996572600646990Parabacteroides distasonis ATCC 8503 chromosome, complete genomeglycosyl transferase family protein4e-0652.4
NC_019896:536500:5553895553895572991911Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeglycosyltransferase6e-0652
NC_014479:3452484:3452484345248434543881905Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeputative glycosyltransferase6e-0652
NC_016047:3632489:3632489363248936344681980Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeputative glycosyltransferase5e-0652
NC_013665:1922000:193576719357671936666900Methanocella paludicola SANAE, complete genomeputative glycosyltransferase5e-0652
NC_014387:2661496:2671875267187526731791305Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeglycosyl transferase GT2 family protein7e-0651.6
NC_014121:3399685:341410134141013415075975Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeglycosyl transferase, family 2/glycosyl transferase family 87e-0651.6
NC_014387:2661496:2670694267069426718661173Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeglycosyl transferase GT2 family protein7e-0651.6
NC_015975:99500:109044109044109850807Lactobacillus ruminis ATCC 27782 chromosome, complete genomeglycosyltransferase8e-0651.6
NC_015577:1794560:181628718162871817264978Treponema azotonutricium ZAS-9 chromosome, complete genomebeta-1,4-galactosyltransferase8e-0651.6
NC_017095:1927118:1938833193883319398821050Fervidobacterium pennivorans DSM 9078 chromosome, complete genomeglycosyl transferase family protein9e-0651.2