Pre_GI: BLASTP Hits

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Query: NC_004129:1848701:1853508 Pseudomonas fluorescens Pf-5, complete genome

Start: 1853508, End: 1853777, Length: 270

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007492:1735595:173726717372671737536270Pseudomonas fluorescens PfO-1, complete genomeflagellar biosynthesis protein4e-39159
NC_017986:4374979:437967543796754379944270Pseudomonas putida ND6 chromosome, complete genomeflagellar biosynthesis protein FliQ1e-38157
NC_009512:1691930:169662616966261696895270Pseudomonas putida F1, complete genomeflagellar biosynthetic protein FliQ1e-38157
NC_002947:4931476:494736649473664947635270Pseudomonas putida KT2440, complete genomeflagellar biosynthesis protein2e-38157
NC_010501:4080937:409666440966644096933270Pseudomonas putida W619, complete genomeflagellar biosynthetic protein FliQ3e-38156
NC_014366:1814000:183466718346671834936270Gamma proteobacterium HdN1, complete genomeFlagellar biosynthesis protein FliQ8e-2199
NC_009654:3849774:387688438768843877153270Marinomonas sp. MWYL1, complete genomeflagellar biosynthetic protein FliQ3e-2097.1
NC_012880:1765920:183218118321811832450270Dickeya dadantii Ech703, complete genomeflagellar biosynthetic protein FliQ7e-1785.9
NC_013892:2689645:269053326905332690802270Xenorhabdus bovienii SS-2004 chromosome, complete genomeflagellar biosynthesis protein2e-1581.3
NC_013851:3300278:330435433043543304623270Allochromatium vinosum DSM 180 chromosome, complete genomeflagellar biosynthetic protein FliQ2e-1580.9
NC_014562:1844268:187527218752721875541270Pantoea vagans C9-1 chromosome, complete genomeProbable flagellar biosynthetic protein fliQ5e-1476.3
NC_009253:2615777:261761926176192617888270Desulfotomaculum reducens MI-1 chromosome, complete genomeflagellar biosynthetic protein FliQ2e-1374.7
NC_019940:293476:300635300635300904270Thioflavicoccus mobilis 8321 chromosome, complete genomeflagellar biosynthetic protein FliQ3e-1373.6
NC_004344:26828:558125581256084273Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein2e-1270.9
NC_016893:43234:570205702057289270Wigglesworthia glossinidia endosymbiont of Glossina morsitansflagellar biosynthesis protein5e-1270.1
NC_008576:4701930:104531045310722270Magnetococcus sp. MC-1, complete genomeflagellar biosynthetic protein FliQ5e-1269.7
NC_021184:2238500:225807322580732258342270Desulfotomaculum gibsoniae DSM 7213, complete genomeflagellar biosynthetic protein FliQ1e-1168.6
NC_007759:1356439:135817813581781358447270Syntrophus aciditrophicus SB, complete genomeflagellar biosynthetic protein2e-1167.8
NC_015714:768500:780464780464780745282Treponema paraluiscuniculi Cuniculi A chromosome, complete genomeIIISP family Type III (virulence-related) secretory pathway protein1e-1065.5
NC_016842:775368:787166787166787447282Treponema pallidum subsp. pertenue str. SamoaD chromosome, completeIIISP family Type III (virulence-related) secretory pathway protein1e-1065.5
NC_016843:775371:787353787353787634282Treponema pallidum subsp. pertenue str. Gauthier chromosome,IIISP family Type III (virulence-related) secretory pathway protein1e-1065.5
NC_016844:775334:787520787520787801282Treponema pallidum subsp. pallidum DAL-1 chromosome, completeIIISP family Type III (virulence-related) secretory pathway protein1e-1065.5
NC_016848:775822:787620787620787901282Treponema pallidum subsp. pertenue str. CDC2 chromosome, completeIIISP family Type III (virulence-related) secretory pathway protein1e-1065.5
NC_000919:773784:785582785582785866285Treponema pallidum subsp. pallidum str. Nichols, complete genomeflagellar biosynthetic protein (fliQ)1e-1065.5
NC_010741:775000:787030787030787314285Treponema pallidum subsp. pallidum SS14, complete genomeflagellar biosynthetic protein1e-1065.5
NC_017268:775000:786832786832787116285Treponema pallidum subsp. pallidum str. Chicago chromosome,flagellar biosynthetic protein FliQ1e-1065.5
NC_021508:775264:787062787062787346285Treponema pallidum subsp. pallidum SS14, complete genomeIIISP family Type III (virulence-related) secretory pathway protein1e-1065.5
NC_012440:659646:664958664958665227270Persephonella marina EX-H1, complete genomeflagellar biosynthetic protein FliQ2e-1064.3
NC_013223:685628:707354707354707629276Desulfohalobium retbaense DSM 5692, complete genomeflagellar biosynthetic protein FliQ2e-1064.3
NC_007519:3527207:354193335419333542202270Desulfovibrio alaskensis G20 chromosome, complete genomeflagellar biosynthetic protein FliQ9e-1062.4
NC_009012:574145:595110595110595379270Clostridium thermocellum ATCC 27405, complete genomeflagellar biosynthetic protein FliQ2e-0961.6
NC_018664:1663324:166913216691321669398267Clostridium acidurici 9a chromosome, complete genomeflagellar biosynthetic protein FliQ2e-0961.6
NC_016894:2931213:293601829360182936284267Acetobacterium woodii DSM 1030 chromosome, complete genomeflagellar biosynthesis protein FliQ2e-0961.2
NC_014652:628435:650692650692650961270Caldicellulosiruptor hydrothermalis 108 chromosome, completeflagellar biosynthetic protein fliq2e-0960.8
NC_009698:2649453:265131626513162651585270Clostridium botulinum A str. Hall chromosome, complete genomeflagellar biosynthesis protein FliQ5e-0959.7
NC_020126:8080574:808962680896268089895270Myxococcus stipitatus DSM 14675, complete genomeputative type III secretion system protein5e-0959.7
NC_017238:272980:287041287041287304264Borrelia afzelii PKo chromosome, complete genomeflagellar biosynthetic protein FliQ6e-0959.7
NC_008277:272741:286802286802287065264Borrelia afzelii PKo, complete genomeflagellar biosynthesis protein6e-0959.7
NC_009664:533021:537206537206537484279Kineococcus radiotolerans SRS30216, complete genomeexport protein FliQ family 38e-0959.3
NC_010520:2860960:286282328628232863092270Clostridium botulinum A3 str. Loch Maree, complete genomeflagellar biosynthesis protein FliQ1e-0858.5
NC_015391:2059191:207716920771692077432264Carnobacterium sp. 17-4 chromosome, complete genomeflagellar biosynthesis protein FliQ1e-0858.2
NC_014328:1135854:114378211437821144051270Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeflagellar biosynthesis protein FliQ2e-0857.8
NC_015500:1337180:135649513564951356764270Treponema brennaborense DSM 12168 chromosome, complete genomeflagellar biosynthetic protein FliQ2e-0857.4
NC_000918:1353310:137931313793131379582270Aquifex aeolicus VF5, complete genomeflagellar biosynthesis protein FliQ3e-0857.4
NC_008593:1103293:112253111225311122800270Clostridium novyi NT, complete genomeflagellar biosynthetic protein FliQ7e-0856.2
NC_015379:2999965:301395230139523014215264Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Flagellar biosynthetic protein8e-0855.8
NC_011126:555483:588780588780589049270Hydrogenobaculum sp. Y04AAS1, complete genomeflagellar biosynthetic protein FliQ2e-0754.7
NC_021182:2883716:289824828982482898517270Clostridium pasteurianum BC1, complete genomeflagellar biosynthetic protein FliQ4e-0753.5
NC_014366:2513352:251578025157802516049270Gamma proteobacterium HdN1, complete genomeType III secretory pathway protein4e-0753.5
NC_020291:4903981:492656349265634926832270Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeflagellar biosynthetic protein FliQ6e-0753.1
NC_014926:1381152:141155514115551411824270Thermovibrio ammonificans HB-1 chromosome, complete genomeflagellar biosynthetic protein FliQ8e-0752.4
NC_009617:4911595:491564949156494915918270Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeexport protein FliQ1e-0652.4
NC_012791:2386000:240476924047692404951183Variovorax paradoxus S110 chromosome 1, complete genomeexport protein FliQ family 32e-0651.2
NC_014150:233194:250344250344250613270Brachyspira murdochii DSM 12563 chromosome, complete genomeflagellar biosynthetic protein FliQ2e-0650.8
NC_012225:377441:380770380770381039270Brachyspira hyodysenteriae WA1, complete genomeflagellar biosynthetic protein (fliQ)2e-0650.8
NC_006156:271410:286692286692286955264Borrelia garinii PBi chromosome linear, complete sequenceflagellar biosynthesis protein5e-0649.7
NC_008346:983816:984593984593984865273Syntrophomonas wolfei subsp. wolfei str. Goettingen, completehypothetical protein6e-0649.3
NC_018607:1134900:113570811357081135977270Brachyspira pilosicoli B2904 chromosome, complete genomeflagellar biosynthetic protein FliQ8e-0649.3
NC_011728:269853:287278287278287541264Borrelia burgdorferi ZS7, complete genomeflagellar biosynthetic protein FliQ9e-0648.9
NC_001318:270488:287910287910288173264Borrelia burgdorferi B31, complete genomeflagellar biosynthesis protein (fliQ)9e-0648.9
NC_015921:272517:286475286475286738264Borrelia bissettii DN127 chromosome, complete genomeflagellar biosynthetic protein FliQ9e-0648.9