Pre_GI: BLASTP Hits

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Query: NC_003197:1611302:1626005 Salmonella typhimurium LT2, complete genome

Start: 1626005, End: 1626394, Length: 390

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016857:1576636:158285815828581583319462Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative translation initiation inhibitor2e-72270
NC_011149:1578451:158904115890411589430390Salmonella enterica subsp. enterica serovar Agona str. SL483,endoribonuclease L-PSP family protein3e-72270
NC_016810:1576636:158285815828581583247390Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein3e-72270
NC_016856:1621279:163598216359821636371390Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative translation initiation inhibitor3e-72270
NC_016860:1614280:162369516236951624084390Salmonella enterica subsp. enterica serovar Typhimurium strendoribonuclease L-PSP family protein3e-72270
NC_016863:1575488:158417315841731584562390Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative translation initiation inhibitor3e-72270
NC_017046:1574057:158274215827421583158417Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein2e-72270
NC_015761:1488807:150350915035091503898390Salmonella bongori NCTC 12419, complete genomehypothetical protein1e-64244
AC_000091:4472000:447749444774944477889396Escherichia coli W3110 DNA, complete genomepredicted mRNA endoribonuclease6e-60229
NC_000913:4462782:447083744708374471232396Escherichia coli K12, complete genomepredicted mRNA endoribonuclease6e-60229
NC_010473:4564590:457264545726454573040396Escherichia coli str. K-12 substr. DH10B, complete genomepredicted mRNA endoribonuclease6e-60229
NC_010498:4821519:482803448280344828429396Escherichia coli SMS-3-5, complete genomeendoribonuclease L-PSP family protein4e-60229
NC_012947:3947238:395762239576223958017396Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeendoribonuclease L-PSP4e-60229
NC_012967:4449576:445609144560914456486396Escherichia coli B str. REL606 chromosome, complete genomeputative mRNA endoribonuclease4e-60229
NC_010658:4494103:450647745064774506872396Shigella boydii CDC 3083-94, complete genomeendoribonuclease L-PSP family protein2e-59226
NC_011742:4795733:480224848022484802643396Escherichia coli S88 chromosome, complete genomemRNA endoribonuclease5e-59226
NC_007613:4217557:424919142491914249586396Shigella boydii Sb227, complete genomehypothetical protein1e-58224
NC_009436:3807420:382036738203673820762396Enterobacter sp. 638, complete genomeendoribonuclease L-PSP3e-58223
NC_015663:3742738:375266437526643753065402Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein2e-56217
NC_020181:1653261:166517216651721665573402Enterobacter aerogenes EA1509E, complete genomeprobable translation initiation inhibitor protein2e-56217
NC_009668:1591290:159437815943781594770393Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceendoribonuclease L-PSP9e-55211
NC_011094:1584038:159345315934531593779327Salmonella enterica subsp. enterica serovar Schwarzengrund strendoribonuclease L-PSP5e-50196
NC_016612:5208936:522213152221315222526396Klebsiella oxytoca KCTC 1686 chromosome, complete genomeendoribonuclease L-PSP family protein5e-40162
NC_011283:1811000:188610318861031886492390Klebsiella pneumoniae 342 chromosome, complete genomeendoribonuclease L-PSP family protein2e-39160
NC_011992:863174:876370876370876777408Acidovorax ebreus TPSY, complete genomeEndoribonuclease L-PSP4e-31133
NC_010512:110932:130333130333130731399Burkholderia cenocepacia MC0-3 chromosome 3, complete sequenceEndoribonuclease L-PSP7e-2199.4
NC_008313:886248:911312911312911713402Ralstonia eutropha H16 chromosome 1, complete sequenceputative translation initiation inhibitor, yjgF family3e-1993.6
NC_007348:2519447:254236525423652542763399Ralstonia eutropha JMP134 chromosome 2, complete sequenceEndoribonuclease L-PSP4e-1683.6
NC_020829:4390417:440964644096464410062417Pseudomonas denitrificans ATCC 13867, complete genomeendoribonuclease L-PSP2e-1581.3
NC_007974:138176:150604150604151227624Ralstonia metallidurans CH34 chromosome 2, complete sequenceEndoribonuclease L-PSP6e-1579.3
NC_003296:1665569:166827616682761668713438Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completehypothetical protein2e-1477.8
NC_003296:1696958:169846616984661698903438Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE TRANSMEMBRANE PROTEIN2e-1477.8
NC_021066:839734:843254843254843466213Raoultella ornithinolytica B6, complete genometranslation initiation inhibitor, yjgF family protein6e-1269.7
NC_010645:1341475:136041313604131360799387Bordetella avium 197N, complete genomeendoribonuclease1e-1065.5
NC_010172:1199725:120944312094431209829387Methylobacterium extorquens PA1, complete genomeEndoribonuclease L-PSP2e-1064.3
NC_011757:1246000:127379612737961274182387Methylobacterium chloromethanicum CM4, complete genomeEndoribonuclease L-PSP3e-1063.5
NC_010645:1341475:136079613607961361197402Bordetella avium 197N, complete genomeendoribonuclease1e-0962
NC_014210:5309121:531140453114045311829426Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,Endoribonuclease L-PSP3e-0960.5
NC_010623:1961685:197300619730061973410405Burkholderia phymatum STM815 chromosome 2, complete sequenceEndoribonuclease L-PSP6e-0959.7
NC_014640:2693060:270855427085542708949396Achromobacter xylosoxidans A8 chromosome, complete genomeendoribonuclease L-PSP family protein8e-0959.3
NC_010623:1961685:201993020199302020382453Burkholderia phymatum STM815 chromosome 2, complete sequenceEndoribonuclease L-PSP2e-0857.8
NC_015277:5211779:523113752311375231598462Sphingobacterium sp. 21 chromosome, complete genomeEndoribonuclease L-PSP3e-0857.4
NC_012982:2415237:243796724379672438374408Hirschia baltica ATCC 49814, complete genomeEndoribonuclease L-PSP2e-0857.4
NC_016860:4024000:404045640404564040836381Salmonella enterica subsp. enterica serovar Typhimurium strtranslation initiation inhibitor4e-0857
NC_003112:673772:689773689773690162390Neisseria meningitidis MC58, complete genomeputative ribonuclease4e-0856.6
NC_010120:609323:631641631641632030390Neisseria meningitidis 053442, complete genomeribonuclease, putative4e-0856.6
NC_008767:613394:634500634500634889390Neisseria meningitidis FAM18, complete genomehypothetical protein4e-0856.6
NC_013016:571255:589884589884590273390Neisseria meningitidis alpha14 chromosome, complete genometranslation initiation inhibitor4e-0856.6
NC_017501:1680075:168249516824951682884390Neisseria meningitidis 8013, complete genomeputative endoribonuclease4e-0856.6
NC_017505:670919:691717691717692106390Neisseria meningitidis alpha710 chromosome, complete genomehypothetical protein4e-0856.6
NC_017513:618500:642487642487642876390Neisseria meningitidis G2136 chromosome, complete genomeendoribonuclease L-PSP4e-0856.6
NC_017514:1568591:156925115692511569640390Neisseria meningitidis M01-240149 chromosome, complete genomeendoribonuclease L-PSP4e-0856.6
NC_017516:1613762:161442216144221614811390Neisseria meningitidis H44/76 chromosome, complete genomeendoribonuclease L-PSP4e-0856.6
NC_017518:743955:765382765382765771390Neisseria meningitidis NZ-05/33 chromosome, complete genomeendoribonuclease L-PSP4e-0856.6
NC_017515:1601954:160261416026141603003390Neisseria meningitidis M04-240196 chromosome, complete genomeendoribonuclease L-PSP4e-0856.6
NC_016935:1365463:139792113979211398301381Paenibacillus mucilaginosus 3016 chromosome, complete genomeendoribonuclease L-PSP6e-0856.2
NC_015690:3941113:397856539785653978864300Paenibacillus mucilaginosus KNP414 chromosome, complete genomeendoribonuclease L-PSP6e-0856.2
NC_010170:2374852:237607623760762376462387Bordetella petrii, complete genomeputative translational inhibitor8e-0855.8
NC_017517:703811:719695719695720084390Neisseria meningitidis M01-240355 chromosome, complete genomeendoribonuclease L-PSP1e-0755.5
NC_008701:391216:401455401455401829375Pyrobaculum islandicum DSM 4184, complete genomeputative endoribonuclease L-PSP3e-0753.9
NC_011126:129937:135039135039135419381Hydrogenobaculum sp. Y04AAS1, complete genomeendoribonuclease L-PSP3e-0753.9
NC_015496:2155816:216533021653302165776447Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomeEndoribonuclease L-PSP5e-0753.1
NC_014221:398636:411607411607411999393Truepera radiovictrix DSM 17093 chromosome, complete genomeendoribonuclease L-PSP6e-0752.8
NC_020156:3157899:317085731708573171375519Nonlabens dokdonensis DSW-6, complete genomeendoribonuclease L-PSP3e-0650.4
NC_020302:1074120:107518810751881075625438Corynebacterium halotolerans YIM 70093 = DSM 44683, completetranslation initiation inhibitor8e-0648.9
NC_014931:2511423:252562525256252526026402Variovorax paradoxus EPS chromosome, complete genomeEndoribonuclease L-PSP9e-0648.9