Pre_GI: BLASTP Hits

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Query: NC_002944:1881405:1881405 Mycobacterium avium subsp. paratuberculosis K-10, complete genome

Start: 1881405, End: 1882076, Length: 672

Host Lineage: Mycobacterium avium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a diary herd in Wisconsin, USA in the 1970's. Environmental organism which causes infections in birds and humans. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, Mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium avium is ubiquitous in the environment, and can be found in stagnant waters and soils. This organism causes tuberculosis in birds and disseminated infections in immunocompromized humans (the elderly, children, and especially patients with AIDS). Infection results in a characteristic pulmonary disease which requires expensive drug therapy for successful treatment. Most prevalent colony morphotypes are smooth opaque, smooth transparent and rough, with the last two being the faster growers in vivo.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015953:46732:631566315663755600Streptomyces sp. SirexAA-E chromosome, complete genomeTetR family transcriptional regulator3e-40165
NC_007005:830467:845008845008845643636Pseudomonas syringae pv. syringae B728a, complete genomeregulatory protein, TetR2e-24112
NC_013929:8474195:850754385075438508133591Streptomyces scabiei 87.22 chromosome, complete genomeTetR family transcriptional regulator3e-24111
NC_016582:1639375:167531116753111675883573Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative TetR family regulator7e-24110
NC_014258:127500:128454128454129002549Pantoea vagans C9-1 plasmid pPag3, complete sequenceHTH-type transcriptional regulator6e-23107
NC_008782:2568027:259582925958292596410582Acidovorax sp. JS42, complete genometranscriptional regulator, TetR family2e-22105
NC_014217:800406:805701805701806249549Starkeya novella DSM 506 chromosome, complete genometranscriptional regulator, TetR family4e-21101
NC_009832:3500000:350540635054063505966561Serratia proteamaculans 568, complete genometranscriptional regulator, TetR family4e-21101
NC_013929:4807910:481708548170854817657573Streptomyces scabiei 87.22 chromosome, complete genomeTetR family transcriptional regulator1e-20100
NC_011663:2568190:258893725889372589494558Shewanella baltica OS223 chromosome, complete genomeTetR family transcriptional regulator1e-2099.8
NC_011983:1746000:174603617460361746614579Agrobacterium radiobacter K84 chromosome 2, complete genometranscriptional regulator protein3e-2098.6
NC_010338:588000:588037588037588642606Caulobacter sp. K31, complete genometranscriptional regulator, TetR family8e-2097.1
NC_004129:3123000:312514131251413125728588Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, TetR family2e-1995.5
NC_010172:4185904:421382142138214214363543Methylobacterium extorquens PA1, complete genomeregulatory protein TetR3e-1892
NC_013592:1602242:160886316088631609432570Dickeya dadantii Ech586, complete genometranscriptional regulator, TetR family4e-1891.3
NC_012660:3689223:369128836912883691878591Pseudomonas fluorescens SBW25 chromosome, complete genomeTetR family transcriptional regulator6e-1890.9
NC_018750:6237875:625588762558876256447561Streptomyces venezuelae ATCC 10712, complete genomeTranscriptional regulator, TetR family6e-1890.9
NC_007492:4563981:456398145639814564538558Pseudomonas fluorescens PfO-1, complete genomeTranscriptional Regulator, TetR family1e-1790.1
NC_012988:4633930:466020846602084660750543Methylobacterium extorquens DM4, complete genomeTetR family transcriptional regulator1e-1790.1
NC_008314:1275617:129317512931751293768594Ralstonia eutropha H16 chromosome 2, complete sequencetranscriptional regulator1e-1789.7
NC_004129:4993974:499953349995335000093561Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, TetR family4e-1788.2
NC_014306:642152:655932655932656531600Erwinia billingiae Eb661, complete genomeTranscriptional regulator, TetR family7e-1787.4
NC_014837:3739408:374879137487913749378588Pantoea sp. At-9b chromosome, complete genomeTetR family transcriptional regulator3e-1685.1
NC_008712:215499:221110221110221676567Arthrobacter aurescens TC1 plasmid TC1, complete sequenceputative Transcriptional regulator, TetR family1e-1583.6
NC_012969:1442147:145618814561881456784597Methylovorus glucosetrophus SIP3-4 chromosome, complete genomeTetR family transcriptional regulator1e-1583.2
NC_014539:743523:770361770361770942582Burkholderia sp. CCGE1003 chromosome 1, complete sequenceregulatory protein TetR2e-1582.8
NC_013595:6978614:698322669832266983801576Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, TetR family3e-1582
NC_015856:4301230:431541643154164316036621Collimonas fungivorans Ter331 chromosome, complete genomeTetR family transcriptional regulator4e-1581.6
NC_012968:1191037:120521612052161205824609Methylotenera mobilis JLW8, complete genometranscriptional regulator, TetR family1e-1480.1
NC_013592:3212834:322058632205863221164579Dickeya dadantii Ech586, complete genometranscriptional regulator, TetR family8e-1477
NC_015723:384000:389388389388389915528Cupriavidus necator N-1 chromosome 2, complete sequenceTetR family transcriptional regulator2e-1272.8
NC_016582:9459566:947325194732519473763513Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative transcriptional regulator, TetR family protein2e-1272.4
NC_012660:1804610:183376918337691834347579Pseudomonas fluorescens SBW25 chromosome, complete genomeputative TetR family regulatory protein2e-1272.4
NC_014310:1086183:109337610933761093957582Ralstonia solanacearum PSI07 megaplasmid, complete sequencetranscriptional regulator, tetr family5e-1271.2
NC_021150:5234000:523936352393635239923561Azotobacter vinelandii CA6, complete genomeTranscriptional regulatory protein, TetR family2e-1065.9
NC_012560:5276000:528147152814715282031561Azotobacter vinelandii DJ, complete genomeTranscriptional regulatory protein, TetR family2e-1065.9
NC_016830:1182765:119124511912451191841597Pseudomonas fluorescens F113 chromosome, complete genomeTetR family transcriptional regulator3e-1065.5
NC_014310:1086183:109266710926671093143477Ralstonia solanacearum PSI07 megaplasmid, complete sequencetranscriptional regulator, tetr family2e-0962.4
NC_008543:2871747:289380228938022894581780Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetranscriptional regulator, TetR family8e-0960.5
NC_008061:2368517:237240123724012373180780Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, TetR family8e-0960.5
NC_010515:1375091:138093013809301381709780Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetranscriptional regulator, TetR family8e-0960.5
NC_018868:2935580:295135029513502951889540Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genometranscriptional regulator1e-0860.1
NC_011001:63986:840228402284789768Burkholderia cenocepacia J2315 chromosome 2, complete sequenceTetR family regulatory protein1e-0860.1
NC_009656:1994392:203873320387332039275543Pseudomonas aeruginosa PA7 chromosome, complete genomeputative transcriptional regulator5e-0858.2
NC_007645:5724000:574193757419375742581645Hahella chejuensis KCTC 2396, complete genomeTranscriptional regulator9e-0857
NC_004193:375416:552830552830553441612Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator1e-0757
NC_016147:1788219:180650518065051807080576Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeTetR family transcriptional regulator4e-0755.1
NC_016023:755237:772087772087772674588Bacillus coagulans 36D1 chromosome, complete genomeTetR family transcriptional regulator4e-0755.1
NC_004193:375416:375416375416675301299886Oceanobacillus iheyensis HTE831, complete genome4e-0755.1
NC_007963:3225306:324092132409213241568648Chromohalobacter salexigens DSM 3043, complete genometranscriptional regulator, TetR family4e-0755.1
NC_011830:4473583:449130044913004491902603Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, TetR family6e-0754.3
NC_007907:3472494:347712934771293477731603Desulfitobacterium hafniense Y51, complete genomehypothetical protein6e-0754.3
NC_019673:3253650:3274646327464632759411296Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein1e-0653.5
NC_008268:3162824:3181094318109431822901197Rhodococcus sp. RHA1, complete genomeprobable transcriptional regulator1e-0653.5
NC_007644:2452244:245224424522442452852609Moorella thermoacetica ATCC 39073, complete genometranscriptional regulator, TetR family1e-0653.5
NC_009439:1075170:109619310961931096795603Pseudomonas mendocina ymp, complete genomeTetR family transcriptional regulator1e-0653.1
NC_010125:2998619:300348830034883004108621Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transcription regulator tetR2e-0652.8
NC_016113:803268:819821819821820408588Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequenceTetR-family protein transcriptional regulator2e-0652.4
NC_014623:7482229:751507575150757515719645Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeTetR family transcriptional regulator3e-0652
NC_008278:925231:933885933885934556672Frankia alni ACN14a, complete genometranscriptional regulatory protein; TetR family4e-0651.6
NC_003902:1416000:142181514218151422441627Xanthomonas campestris pv. campestris str. ATCC 33913, completetranscriptional regulator4e-0651.6
NC_010688:3515885:352608335260833526709627Xanthomonas campestris pv. campestris, complete genometranscriptional regulator, TetR family4e-0651.6