Pre_GI: OUP Neighbours

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Query: NC_016844:775334 Treponema pallidum subsp. pallidum DAL-1 chromosome, complete

D: 35.8628

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This organism is the causative agent of endemic and venereal syphilis. This sexual transmitted disease was first discovered in Europe at the end of the fifteenth century, however, the causative agent was not identified until 1905. At one time syphilis was the third most commonly reported communicable disease in the USA. Syphilis is characterized by multiple clinical stages and long periods of latent, asymptomatic infection. Although effective therapies have been available since the introduction of penicillin, syphilis remains a global health problem.

Number of Neighbours: 82




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_015714:1*Treponema paraluiscuniculi Cuniculi A chromosome, complete genome77.6991 %Subject ←→ Query32.2258
NC_015714:238891*Treponema paraluiscuniculi Cuniculi A chromosome, complete genome82.405 %Subject ←→ Query33.229
NC_016842:1*Treponema pallidum subsp. pertenue str. SamoaD chromosome, complete80.4044 %Subject ←→ Query33.6701
NC_010741:949732*Treponema pallidum subsp. pallidum SS14, complete genome81.9547 %Subject ←→ Query33.6941
NC_016842:748419*Treponema pallidum subsp. pertenue str. SamoaD chromosome, complete82.5613 %Subject ←→ Query33.7123
NC_016843:1*Treponema pallidum subsp. pertenue str. Gauthier chromosome,80.3922 %Subject ←→ Query33.7521
NC_000919:107373*Treponema pallidum subsp. pallidum str. Nichols, complete genome81.3879 %Subject ←→ Query33.8461
NC_010741:107370*Treponema pallidum subsp. pallidum SS14, complete genome81.3879 %Subject ←→ Query33.9494
NC_017268:1*Treponema pallidum subsp. pallidum str. Chicago chromosome,80.3493 %Subject ←→ Query34.0577
NC_021508:107384*Treponema pallidum subsp. pallidum SS14, complete genome81.394 %Subject ←→ Query34.2656
NC_015714:943178*Treponema paraluiscuniculi Cuniculi A chromosome, complete genome78.0086 %Subject ←→ Query34.2929
NC_010741:775000*Treponema pallidum subsp. pallidum SS14, complete genome92.7512 %Subject ←→ Query34.3142
NC_017268:949543*Treponema pallidum subsp. pallidum str. Chicago chromosome,82.1415 %Subject ←→ Query34.6634
NC_021508:949769*Treponema pallidum subsp. pallidum SS14, complete genome81.9516 %Subject ←→ Query34.8452
NC_016844:107382*Treponema pallidum subsp. pallidum DAL-1 chromosome, complete81.3909 %Subject ←→ Query34.9891
NC_017268:107387*Treponema pallidum subsp. pallidum str. Chicago chromosome,81.3909 %Subject ←→ Query35.0316
NC_000919:948287*Treponema pallidum subsp. pallidum str. Nichols, complete genome81.9792 %Subject ←→ Query35.037
NC_016842:949899*Treponema pallidum subsp. pertenue str. SamoaD chromosome, complete78.5662 %Subject ←→ Query35.1975
NC_000919:746875Treponema pallidum subsp. pallidum str. Nichols, complete genome82.1109 %Subject ←→ Query35.1998
NC_016843:775371*Treponema pallidum subsp. pertenue str. Gauthier chromosome,98.4252 %Subject ←→ Query35.3265
NC_016848:775822*Treponema pallidum subsp. pertenue str. CDC2 chromosome, complete92.5429 %Subject ←→ Query35.369
NC_015714:768500*Treponema paraluiscuniculi Cuniculi A chromosome, complete genome96.8536 %Subject ←→ Query35.483
NC_016844:950231*Treponema pallidum subsp. pallidum DAL-1 chromosome, complete82.1415 %Subject ←→ Query35.5106
NC_017268:775000*Treponema pallidum subsp. pallidum str. Chicago chromosome,92.6869 %Subject ←→ Query35.5446
NC_016843:950000*Treponema pallidum subsp. pertenue str. Gauthier chromosome,78.508 %Subject ←→ Query35.6176
NC_021508:775264*Treponema pallidum subsp. pallidum SS14, complete genome92.5919 %Subject ←→ Query36.5637
NC_015714:741044*Treponema paraluiscuniculi Cuniculi A chromosome, complete genome83.3824 %Subject ←→ Query36.7394
NC_016848:950353*Treponema pallidum subsp. pertenue str. CDC2 chromosome, complete78.5723 %Subject ←→ Query36.963
NC_000919:773784Treponema pallidum subsp. pallidum str. Nichols, complete genome92.5797 %Subject ←→ Query36.964
NC_021508:12543*Treponema pallidum subsp. pallidum SS14, complete genome81.2592 %Subject ←→ Query36.9954
NC_016844:12545*Treponema pallidum subsp. pallidum DAL-1 chromosome, complete81.2623 %Subject ←→ Query37.0075
NC_010741:745357Treponema pallidum subsp. pallidum SS14, complete genome83.652 %Subject ←→ Query37.2477
NC_000919:12545*Treponema pallidum subsp. pallidum str. Nichols, complete genome81.2745 %Subject ←→ Query37.2678
NC_010741:12542*Treponema pallidum subsp. pallidum SS14, complete genome81.3113 %Subject ←→ Query37.3966
NC_016848:12548*Treponema pallidum subsp. pertenue str. CDC2 chromosome, complete81.2469 %Subject ←→ Query37.5766
NC_017268:747429*Treponema pallidum subsp. pallidum str. Chicago chromosome,83.1955 %Subject ←→ Query40.7332
NC_021508:745388*Treponema pallidum subsp. pallidum SS14, complete genome83.6091 %Subject ←→ Query41.5767
NC_016848:748873Treponema pallidum subsp. pertenue str. CDC2 chromosome, complete82.1875 %Subject ←→ Query41.8665
NC_016844:748117*Treponema pallidum subsp. pallidum DAL-1 chromosome, complete82.6869 %Subject ←→ Query41.8991
NC_016842:775368*Treponema pallidum subsp. pertenue str. SamoaD chromosome, complete92.2518 %Subject ←→ Query42.0015
NC_016843:747950*Treponema pallidum subsp. pertenue str. Gauthier chromosome,81.6759 %Subject ←→ Query42.0177