Query: NC_013199:282901 Lactobacillus rhamnosus Lc 705, complete genome
D: 34.5452
Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria
General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.
Number of Neighbours: 20
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Subject Host Description |
Compositional Similarity |
Proposed Island Flow | Subject Island D |
---|
NC_008497:556365* | Lactobacillus brevis ATCC 367, complete genome | 75.0276 % | Subject ←→ Query | 27.4289 |
NC_008526:74500* | Lactobacillus casei ATCC 334, complete genome | 77.6716 % | Subject ←→ Query | 28.9383 |
NC_013895:35410* | Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, complete | 75.7966 % | Subject ←→ Query | 29.189 |
NC_015572:293665* | Methylomonas methanica MC09 chromosome, complete genome | 75.3033 % | Subject ←→ Query | 29.572 |
NC_015428:2291430* | Lactobacillus buchneri NRRL B-30929 chromosome, complete genome | 75.4412 % | Subject ←→ Query | 30.5599 |
NC_007520:2128178* | Thiomicrospira crunogena XCL-2, complete genome | 75.0705 % | Subject ←→ Query | 31.6498 |
NC_012880:3915500* | Dickeya dadantii Ech703, complete genome | 75.7935 % | Subject ←→ Query | 32.55 |
NC_013198:1921500* | Lactobacillus rhamnosus GG, complete genome | 81.7647 % | Subject ←→ Query | 33.277 |
NC_013198:298000* | Lactobacillus rhamnosus GG, complete genome | 91.9547 % | Subject ←→ Query | 33.8795 |
NC_015572:1 | Methylomonas methanica MC09 chromosome, complete genome | 76.0478 % | Subject ←→ Query | 34.0009 |
NC_015572:1421782 | Methylomonas methanica MC09 chromosome, complete genome | 76.3634 % | Subject ←→ Query | 34.0502 |
NC_013199:1886271* | Lactobacillus rhamnosus Lc 705, complete genome | 82.2028 % | Subject ←→ Query | 35.0179 |
NC_008526:817628* | Lactobacillus casei ATCC 334, complete genome | 78.8879 % | Subject ←→ Query | 36.4528 |
NC_008526:2489196* | Lactobacillus casei ATCC 334, complete genome | 77.4877 % | Subject ←→ Query | 36.8865 |
NC_013199:2536705* | Lactobacillus rhamnosus Lc 705, complete genome | 80.8548 % | Subject ←→ Query | 37.5527 |
NC_015572:4916430 | Methylomonas methanica MC09 chromosome, complete genome | 77.0098 % | Subject ←→ Query | 37.6362 |
NC_013198:813830* | Lactobacillus rhamnosus GG, complete genome | 82.1324 % | Subject ←→ Query | 37.9547 |
NC_013199:811929* | Lactobacillus rhamnosus Lc 705, complete genome | 82.4387 % | Subject ←→ Query | 39.2072 |
NC_015572:4209000* | Methylomonas methanica MC09 chromosome, complete genome | 76.8107 % | Subject ←→ Query | 40.0218 |
NC_010999:880878* | Lactobacillus casei, complete genome | 78.5018 % | Subject ←→ Query | 40.5776 |