Pre_GI: OUP Neighbours

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Query: NC_012962:1661683 Photorhabdus asymbiotica, complete genome

D: 40.4188

Host Lineage: Photorhabdus asymbiotica; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a North American clinical isolate from human blood. Photorhabdus asymbiota, formerly Xenorhabdus luminescens, has been isolated from human wound and blood infections often in association with spider bites. This species can also be isolated from the entomopathogenic nematode Heterorhabditis indica. Photorhabdus asymbiota is divided into two subspecies, subsp. australis which contains the Australian clinical isolates and subsp. asymbiota which contains the North American isolates. Photorhabdus is currently subdivided into three species, luminescens, temperate and asymbiotica all of which have been isolated as symbionts of heterorhabditid nematodes. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype.

Number of Neighbours: 24




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_010634:3269010*Yersinia pseudotuberculosis PB1/+, complete genome77.1661 %Subject Query28.5333
NC_015224:279037Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,77.9167 %Subject Query28.7938
NC_008149:3648139Yersinia pestis Nepal516, complete genome77.6409 %Subject Query29.4565
NC_010465:804249Yersinia pseudotuberculosis YPIII, complete genome76.5227 %Subject Query29.499
NC_008150:3711953Yersinia pestis Antiqua, complete genome77.6164 %Subject Query29.7483
NC_008150:2599661Yersinia pestis Antiqua, complete genome75.9773 %Subject Query29.7787
NC_012880:1127997*Dickeya dadantii Ech703, complete genome77.1232 %Subject ←→ Query30.9614
NC_006155:3040769Yersinia pseudotuberculosis IP 32953, complete genome78.9675 %Subject ←→ Query31.1041
NC_010634:2960000Yersinia pseudotuberculosis PB1/+, complete genome78.6642 %Subject ←→ Query31.2014
NC_012962:3864000*Photorhabdus asymbiotica, complete genome82.2763 %Subject ←→ Query31.492
NC_004088:1801819Yersinia pestis KIM, complete genome77.7911 %Subject ←→ Query31.8002
NC_008149:2411161Yersinia pestis Nepal516, complete genome79.2341 %Subject ←→ Query32.2349
NC_010465:1724000Yersinia pseudotuberculosis YPIII, complete genome78.2138 %Subject ←→ Query32.6727
NC_013592:3397304Dickeya dadantii Ech586, complete genome76.7096 %Subject ←→ Query32.6808
NC_012880:3645304Dickeya dadantii Ech703, complete genome75.4718 %Subject ←→ Query33.3293
NC_003143:2849377Yersinia pestis CO92, complete genome78.9246 %Subject ←→ Query33.8521
NC_010159:1861465Yersinia pestis Angola, complete genome78.8726 %Subject ←→ Query33.8947
NC_005810:2613456Yersinia pestis biovar Microtus str. 91001, complete genome78.8235 %Subject ←→ Query33.9433
NC_013592:3618248*Dickeya dadantii Ech586, complete genome76.2898 %Subject ←→ Query34.4581
NC_012962:3568046Photorhabdus asymbiotica, complete genome84.6232 %Subject ←→ Query37.813
NC_011149:2040396Salmonella enterica subsp. enterica serovar Agona str. SL483,75.7935 %Subject ←→ Query37.9381
NC_005126:1265071Photorhabdus luminescens subsp. laumondii TTO1, complete genome81.0815 %Subject ←→ Query37.9976
NC_012779:2856051Edwardsiella ictaluri 93-146, complete genome75.2114 %Subject ←→ Query40.677
NC_014228:3282500Xenorhabdus nematophila ATCC 19061, complete genome75.9651 %Subject ←→ Query41.4806