Pre_GI: OUP Neighbours

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Query: NC_010159:1861465 Yersinia pestis Angola, complete genome

D: 33.8947

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated prior to 1985 and belongs to the antiqua biovar. It can ferment rhamnonse and melibiose which is a property usually associated with Yersinia pseudotuberculosis. Strain Angola belongs to a group of atypical Yersinia pestis strains with genotypic similarities that are intermediate between Y. pestis and Y. pseudotuberuclosis strains. Genotypic studies indicate that strain Angola is the oldest Y. pestis strain analyzed to date. It carries three plasmids that are similar to other Y. pestis plasmids but have aberrant sizes. The critical virulence factor, the V antigen, is different than that encoded by typical strains of Y. pestis and there is a deletion that affects the F1 operon. Strain Angola has been shown to be virulent by aerosol in mice.

Number of Neighbours: 37




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_010634:3269010*Yersinia pseudotuberculosis PB1/+, complete genome75.9283 %Subject ←→ Query28.5333
NC_015224:279037Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,78.2292 %Subject ←→ Query28.7938
NC_010468:1343228Escherichia coli ATCC 8739, complete genome75.1869 %Subject ←→ Query29.0512
NC_012912:4737703Dickeya zeae Ech1591, complete genome76.5686 %Subject ←→ Query29.5142
NC_015968:204969*Enterobacter asburiae LF7a chromosome, complete genome76.3787 %Subject ←→ Query30.2205
NC_012880:1711062*Dickeya dadantii Ech703, complete genome75.6618 %Subject ←→ Query30.2924
NC_008149:1221637Yersinia pestis Nepal516, complete genome75.72 %Subject ←→ Query30.5812
NC_012880:1127997*Dickeya dadantii Ech703, complete genome77.6072 %Subject ←→ Query30.9614
NC_006155:3040769Yersinia pseudotuberculosis IP 32953, complete genome94.2555 %Subject ←→ Query31.1041
NC_006511:3759550Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC77.8952 %Subject ←→ Query31.1345
NC_010634:2960000Yersinia pseudotuberculosis PB1/+, complete genome93.413 %Subject ←→ Query31.2014
NC_012962:3864000*Photorhabdus asymbiotica, complete genome75.2053 %Subject ←→ Query31.492
NC_011149:3895921Salmonella enterica subsp. enterica serovar Agona str. SL483,77.2855 %Subject ←→ Query31.5601
NC_004088:1801819Yersinia pestis KIM, complete genome92.356 %Subject ←→ Query31.8002
NC_004631:3841975Salmonella enterica subsp. enterica serovar Typhi Ty2, complete77.1109 %Subject ←→ Query32.0647
NC_010102:3919999Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,76.8505 %Subject ←→ Query32.0708
NC_003197:3971905Salmonella typhimurium LT2, complete genome77.3254 %Subject ←→ Query32.0829
NC_008149:2411161Yersinia pestis Nepal516, complete genome96.0233 %Subject ←→ Query32.2349
NC_011083:3985618Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,77.212 %Subject ←→ Query32.4599
NC_003198:3855157Salmonella enterica subsp. enterica serovar Typhi str. CT18,77.4632 %Subject ←→ Query32.5632
NC_010465:1724000Yersinia pseudotuberculosis YPIII, complete genome94.3168 %Subject ←→ Query32.6727
NC_013592:3397304Dickeya dadantii Ech586, complete genome76.5625 %Subject ←→ Query32.6808
NC_010634:1565788Yersinia pseudotuberculosis PB1/+, complete genome77.9197 %Subject ←→ Query33.0113
NC_006155:1567306Yersinia pseudotuberculosis IP 32953, complete genome78.1771 %Subject ←→ Query33.2342
NC_012880:3645304Dickeya dadantii Ech703, complete genome75.0674 %Subject ←→ Query33.3293
NC_003143:2849377Yersinia pestis CO92, complete genome97.0864 %Subject ←→ Query33.8521
NC_005810:2613456Yersinia pestis biovar Microtus str. 91001, complete genome97.1262 %Subject ←→ Query33.9433
NC_015224:3191000Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,84.8039 %Subject ←→ Query34.0665
NC_013592:3618248*Dickeya dadantii Ech586, complete genome77.7053 %Subject ←→ Query34.4581
NC_013421:1545386Pectobacterium wasabiae WPP163, complete genome77.6348 %Subject ←→ Query35.9253
NC_013421:1143500Pectobacterium wasabiae WPP163, complete genome76.636 %Subject ←→ Query36.4256
NC_012962:3568046Photorhabdus asymbiotica, complete genome77.7788 %Subject ←→ Query37.813
NC_011149:2040396Salmonella enterica subsp. enterica serovar Agona str. SL483,76.4614 %Subject ←→ Query37.9381
NC_005126:1265071Photorhabdus luminescens subsp. laumondii TTO1, complete genome75.2175 %Subject ←→ Query37.9976
NC_011080:3941909Salmonella enterica subsp. enterica serovar Newport str. SL254,77.405 %Subject ←→ Query39.4334
NC_012962:1661683Photorhabdus asymbiotica, complete genome78.8726 %Subject ←→ Query40.4188
NC_014541:1165991Ferrimonas balearica DSM 9799 chromosome, complete genome75.8854 %Subject Query51.4043