Pre_GI Gene

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Host: NC_012808 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012808:4235567 Methylobacterium extorquens AM1, complete genome

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
42355674236223657putative glutathione S-transferaseQuickGO ontologyBLASTP
423657442377881215intracellular PHB depolymerase polyhydroxyalkanoate depolymeraseQuickGO ontologyBLASTP
42382234238540318Ribosomal protein S21QuickGO ontologyBLASTP
42386404239029390putative response regulator CheY-like proteinQuickGO ontologyBLASTP
42393094240094786putative aminohydrolaseamidotransferaseQuickGO ontologyBLASTP
42402464241037792hypothetical proteinBLASTP
424106642421121047Mesaconyl-CoA hydrataseQuickGO ontologyBLASTP
42423074242597291hypothetical proteinBLASTP
4242720424279576tRNA-AlaQuickGO ontologyBLASTP
42429074243092186hypothetical protein
42450404245219180hypothetical proteinBLASTP
42451234245611489hypothetical proteinBLASTP
42460194246234216hypothetical protein
42465484246880333hypothetical proteinBLASTP
42468674247163297hypothetical protein
42486314248936306hypothetical protein
424877542502261452putative sensory boxGGDEF family proteinQuickGO ontologyBLASTP
425058142523351755putative phosphodiesteraseQuickGO ontologyBLASTP
42527744253082309hypothetical proteinBLASTP
42548014255373573BLASTP
42562134256977765hypothetical proteinBLASTP
425702342581261104hypothetical proteinBLASTP