Pre_GI: BLASTP Hits

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Query: NC_012808:4235567:4242307 Methylobacterium extorquens AM1, complete genome

Start: 4242307, End: 4242597, Length: 291

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012988:4633930:464066746406674640957291Methylobacterium extorquens DM4, complete genomehypothetical protein2e-34144
NC_011757:4293000:429751142975114297801291Methylobacterium chloromethanicum CM4, complete genomeprotein of unknown function YGGT2e-34144
NC_010172:4185904:419396141939614194272312Methylobacterium extorquens PA1, complete genomeprotein of unknown function YGGT4e-34143
NC_016795:456110:481843481843482133291Brucella abortus A13334 chromosome 1, complete sequencehypothetical protein7e-1475.9
NC_016778:1216739:124251312425131242803291Brucella canis HSK A52141 chromosome 1, complete sequencehypothetical protein7e-1475.9