Pre_GI: BLASTP Hits

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Query: NC_012808:4235567:4257023 Methylobacterium extorquens AM1, complete genome

Start: 4257023, End: 4258126, Length: 1104

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011757:217739:2249672249672260701104Methylobacterium chloromethanicum CM4, complete genomehypothetical protein0640
NC_010511:3947948:3969066396906639702291164Methylobacterium sp. 4-46 chromosome, complete genomehypothetical protein1e-126453
NC_011894:585637:5941365941365952991164Methylobacterium nodulans ORS 2060, complete genomehypothetical protein2e-118425
NC_010511:6067000:6113534611353461148051272Methylobacterium sp. 4-46 chromosome, complete genomehypothetical protein2e-112405
NC_004463:6924150:6960405696040569614481044Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein2e-54213
NC_011894:2385834:2398465239846523995771113Methylobacterium nodulans ORS 2060, complete genomeTRAP-type uncharacterized transport system periplasmic component-like protein3e-45182
NC_009952:1984955:2009151200915120102031053Dinoroseobacter shibae DFL 12, complete genomeputative TRAP transporter solute receptor2e-1273.9
NC_018524:2423016:244008124400812440977897Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeTRAP transporter solute receptor, TAXI family protein3e-1066.2
NC_014914:1327245:1343595134359513447281134Taylorella equigenitalis MCE9 chromosome, complete genomeTRAP transporter solute receptor, unknown substrate 19e-0754.7
NC_011963:3073283:307328330732833074236954Rhodobacter sphaeroides KD131 chromosome 1, complete sequenceTRAP transporter solute receptor, TAXI family9e-0651.6