Pre_GI: BLASTP Hits

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Query: NC_012808:4235567:4236574 Methylobacterium extorquens AM1, complete genome

Start: 4236574, End: 4237788, Length: 1215

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010172:4185904:4188227418822741894411215Methylobacterium extorquens PA1, complete genomepolyhydroxyalkanoate depolymerase, intracellular0816
NC_012988:4633930:4634937463493746361511215Methylobacterium extorquens DM4, complete genomeintracellular PHB depolymerase, polyhydroxyalkanoate depolymerase0815
NC_008781:2883968:2899971289997129012001230Polaromonas naphthalenivorans CJ2, complete genomepolyhydroxyalkanoate depolymerase, intracellular7e-133474
NC_008543:582129:5827015827015840561356Burkholderia cenocepacia HI2424 chromosome 2, complete sequencepolyhydroxyalkanoate depolymerase, intracellular2e-118426
NC_015726:2862500:2862742286274228639561215Cupriavidus necator N-1 chromosome 1, complete sequenceintracellular poly(3-hydroxybutyrate) depolymerase PhaZ9e-118423
NC_011001:854713:8552828552828566371356Burkholderia cenocepacia J2315 chromosome 2, complete sequencepoly[D-(-)-3-hydroxybutyrate] depolymerase3e-117422
NC_013757:3897413:3927748392774839289921245Geodermatophilus obscurus DSM 43160, complete genomepolyhydroxyalkanoate depolymerase, intracellular7e-114410
NC_011386:136223:1348461348461364291584Oligotropha carboxidovorans OM5, complete genomepolyhydroxyalkanoate depolymerase, intracellular4e-92338
NC_015684:362236:3925353925353938631329Oligotropha carboxidovorans OM5 chromosome, complete genomepolyhydroxyalkanoate depolymerase PhaZ7e-92337
NC_010725:594500:6175526175526187961245Methylobacterium populi BJ001, complete genomepolyhydroxyalkanoate depolymerase, intracellular2e-91336
NC_010511:5169338:5179880517988051812201341Methylobacterium sp. 4-46 chromosome, complete genomepolyhydroxyalkanoate depolymerase6e-91334
NC_012808:420334:4433254433254445691245Methylobacterium extorquens AM1, complete genomeintracellular PHB depolymerase3e-90332
NC_010172:632180:6556796556796569231245Methylobacterium extorquens PA1, complete genomepolyhydroxyalkanoate depolymerase, intracellular3e-90332
NC_011757:577611:6011176011176023611245Methylobacterium chloromethanicum CM4, complete genomepolyhydroxyalkanoate depolymerase, intracellular3e-90332
NC_010002:3980832:3983219398321939845921374Delftia acidovorans SPH-1, complete genomepolyhydroxyalkanoate depolymerase, intracellular2e-88326
NC_015563:3571682:3593621359362135949941374Delftia sp. Cs1-4 chromosome, complete genomepolyhydroxyalkanoate depolymerase, intracellular5e-88325
NC_009049:2131017:2159979215997921612501272Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequencepolyhydroxyalkanoate depolymerase, intracellular2e-78293
NC_013446:2655955:267315426731542673807654Comamonas testosteroni CNB-2, complete genomepolyhydroxyalkanoate depolymerase3e-34146
NC_013446:2655955:267236826723682673000633Comamonas testosteroni CNB-2, complete genomepolyhydroxyalkanoate depolymerase8e-21101