Pre_GI: BLASTP Hits

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Query: NC_012808:4235567:4238640 Methylobacterium extorquens AM1, complete genome

Start: 4238640, End: 4239029, Length: 390

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012988:4633930:463700246370024637391390Methylobacterium extorquens DM4, complete genomeresponse regulator8e-66248
NC_010172:4185904:419029441902944190683390Methylobacterium extorquens PA1, complete genomeresponse regulator receiver8e-66248
NC_011757:4293000:429384442938444294233390Methylobacterium chloromethanicum CM4, complete genomeresponse regulator receiver protein8e-66248
NC_009445:1453132:145313214531321453536405Bradyrhizobium sp. ORS 278 chromosome, complete genometwo-component response regulator2e-1787.8
NC_009485:7021228:704724970472497047653405Bradyrhizobium sp. BTAi1 chromosome, complete genometwo-component response regulator2e-1684.3
NC_010511:7024412:705057470505747050954381Methylobacterium sp. 4-46 chromosome, complete genomeresponse regulator receiver protein4e-1476.6
NC_010172:3712000:372749337274933727873381Methylobacterium extorquens PA1, complete genomeresponse regulator receiver6e-1475.9
NC_020453:1785473:179139217913921791775384Agromonas oligotrophica S58 DNA, complete genomeresponse regulator receiver domain-containing protein5e-1269.7
NC_012988:4075429:409341640934164093715300Methylobacterium extorquens DM4, complete genome3e-1167.4
NC_011757:4293000:431211443121144312599486Methylobacterium chloromethanicum CM4, complete genomeresponse regulator receiver protein2e-0960.8
NC_010505:2657683:266680126668012667211411Methylobacterium radiotolerans JCM 2831, complete genomeresponse regulator receiver protein4e-0960.1
NC_004463:5722468:574022157402215740616396Bradyrhizobium japonicum USDA 110, complete genometwo-component response regulator8e-0959.3
NC_012660:5571500:558993655899365590346411Pseudomonas fluorescens SBW25 chromosome, complete genomeputative two-component system response regulator9e-0958.9
NC_010322:3315024:334008633400863340448363Pseudomonas putida GB-1 chromosome, complete genomeresponse regulator receiver protein1e-0858.9
NC_017249:1476500:148688714868871487303417Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein1e-0858.5
NC_017249:3181976:318796131879613188287327Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein3e-0857.4
NC_020453:1785473:1792687179268717938231137Agromonas oligotrophica S58 DNA, complete genomesignal transduction histidine kinase4e-0856.6
NC_014640:4532095:453331345333134533702390Achromobacter xylosoxidans A8 chromosome, complete genomeresponse regulator 122e-0755.1
NC_007761:3047321:305125730512573051790534Rhizobium etli CFN 42, complete genomeprobable two-component response regulator protein6e-0753.1
NC_008340:2272692:2284341228434122857951455Alkalilimnicola ehrlichei MLHE-1, complete genometwo component, sigma54 specific, transcriptional regulator, Fis family2e-0651.2
NC_010322:3315024:334099633409963341412417Pseudomonas putida GB-1 chromosome, complete genomeresponse regulator receiver protein2e-0651.2
NC_004129:5373886:545217354521735452583411Pseudomonas fluorescens Pf-5, complete genomeresponse regulator3e-0650.4
NC_011894:3623500:3624775362477536267631989Methylobacterium nodulans ORS 2060, complete genomePAS/PAC sensor hybrid histidine kinase5e-0650.1