Pre_GI: BLASTP Hits

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Query: NC_012808:4235567:4254801 Methylobacterium extorquens AM1, complete genome

Start: 4254801, End: 4255373, Length: 573

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011757:217739:2222752222752233181044Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator of molybdate metabolism, LysR family1e-97355
NC_007759:1419171:1440363144036314423932031Syntrophus aciditrophicus SB, complete genomemolybdopterin biosynthesis protein5e-26117
NC_008390:987052:9892589892589903641107Burkholderia cepacia AMMD chromosome 1, complete sequencetranscriptional regulator of molybdate metabolism, LysR family1e-25116
NC_014972:2371647:2394411239441123963361926Desulfobulbus propionicus DSM 2032 chromosome, complete genomemolybdopterin molybdochelatase4e-23107
NC_010718:464405:4706714706714725991929Natranaerobius thermophilus JW/NM-WN-LF, complete genomemolybdenum cofactor synthesis domain protein1e-21102
NC_014624:1349950:1357551135755113594851935Eubacterium limosum KIST612 chromosome, complete genomemolybdenum cofactor synthesis domain-containing protein4e-21101
NC_014632:1404000:1421718142171814236101893Ilyobacter polytropus DSM 2926 chromosome, complete genomemolybdopterin molybdochelatase3e-2097.8
NC_009698:1985404:1996069199606919979731905Clostridium botulinum A str. Hall chromosome, complete genomeLysR family transcriptional regulator4e-2097.8
NC_009697:1985187:1995852199585219977561905Clostridium botulinum A str. ATCC 19397 chromosome, completemolybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein4e-2097.8
NC_009495:2056546:2067211206721120691151905Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeLysR family transcriptional regulator4e-2097.8
NC_012563:2203037:2213702221370222156061905Clostridium botulinum A2 str. Kyoto, complete genomemolybdopterin cofactor synthesis/binding domain protein4e-2097.8
NC_010520:2171584:2184792218479221866961905Clostridium botulinum A3 str. Loch Maree, complete genomemolybdopterin biosynthesis enzyme MoeA / putative molybdate binding domain4e-2097.4
NC_017297:2114222:2125458212545821273621905Clostridium botulinum F str. 230613 chromosome, complete genomemolybdopterin cofactor synthesis/binding domain protein1e-1995.9
NC_009699:2116500:2125355212535521272591905Clostridium botulinum F str. Langeland chromosome, complete genomemolybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein1e-1995.9
NC_010516:2064027:2075287207528720771911905Clostridium botulinum B1 str. Okra, complete genomemolybdopterin biosynthesis enzyme MoeA / putative molybdate binding domain2e-1995.1
NC_015320:211147:2092052092052111631959Archaeoglobus veneficus SNP6 chromosome, complete genomemolybdenum cofactor synthesis domain-containing protein5e-1890.9
NC_014972:2371647:239778823977882398699912Desulfobulbus propionicus DSM 2032 chromosome, complete genomeexcisionase family DNA-binding domain-containing protein3e-1788.2
NC_000917:829159:8304008304008323641965Archaeoglobus fulgidus DSM 4304, complete genomemolybdenum cofactor biosynthesis protein (moeA-1)1e-1685.9
NC_013406:4000518:400801840080184008968951Paenibacillus sp. Y412MC10 chromosome, complete genomeexcisionase family DNA-binding domain-containing protein3e-1685.1
NC_016148:1021138:1047221104722110491371917Thermovirga lienii DSM 17291 chromosome, complete genomemolybdenum cofactor synthesis domain-containing protein4e-1684.3
NC_019791:1154816:1161724116172411636731950Caldisphaera lagunensis DSM 15908 chromosome, complete genomemolybdenum cofactor synthesis domain-containing protein4e-1684.3
NC_010674:3141228:314386831438683144821954Clostridium botulinum B str. Eklund 17B, complete genomeperiplasmic molybdate-binding protein/domain2e-1582
NC_021182:1077721:1095360109536010963971038Clostridium pasteurianum BC1, complete genomeDNA-binding protein, excisionase family3e-1581.6
NC_014961:445717:4457174457174476811965Desulfurococcus mucosus DSM 2162 chromosome, complete genomemolybdopterin molybdochelatase3e-1581.6
NC_013517:1249466:126192312619231262885963Sebaldella termitidis ATCC 33386, complete genomeDNA binding domain protein, excisionase family3e-1581.6
NC_019748:4129500:4140905414090541420591155Stanieria cyanosphaera PCC 7437, complete genometranscriptional regulator of molybdate metabolism, XRE family4e-1581.3
NC_015275:521436:548286548286549245960Clostridium lentocellum DSM 5427 chromosome, complete genomeDNA binding domain protein, excisionase family2e-1478.6
NC_017082:5925357:592773959277395928632894Bradyrhizobium sp. S23321, complete genomehypothetical protein4e-1477.8
NC_009617:2304390:232063323206332321598966Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeDNA binding domain-containing protein1e-1376.3
NC_014328:522045:525313525313526272960Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative molybdate-binding protein2e-1375.9
NC_021182:3438601:345454434545443455521978Clostridium pasteurianum BC1, complete genomeDNA-binding protein, excisionase family3e-1375.1
NC_016935:5017317:501833850183385019297960Paenibacillus mucilaginosus 3016 chromosome, complete genomeexcisionase family DNA binding domain-containing protein2e-1272
NC_015690:5263108:526412952641295265088960Paenibacillus mucilaginosus KNP414 chromosome, complete genomeexcisionase family DNA binding domain-containing protein2e-1272
NC_019978:1244000:1256789125678912586961908Halobacteroides halobius DSM 5150, complete genomemolybdenum cofactor synthesis domain protein3e-1271.6
NC_009720:4367584:437463943746394375592954Xanthobacter autotrophicus Py2, complete genomeDNA binding domain-containing protein7e-1270.5
NC_012988:2541941:255165125516512552604954Methylobacterium extorquens DM4, complete genomeregulator; molybdate and DNA-binding domains, excisionase family protein2e-1168.9
NC_011837:3052000:306952030695203070482963Clostridium kluyveri NBRC 12016, complete genomehypothetical protein2e-1065.5
NC_017295:279633:282369282369283328960Clostridium acetobutylicum EA 2018 chromosome, complete genomeMolybdate-binding protein4e-1064.7
NC_015687:279641:282377282377283336960Clostridium acetobutylicum DSM 1731 chromosome, complete genomemolybdate-binding protein4e-1064.7
NC_003030:279643:282379282379283338960Clostridium acetobutylicum ATCC 824, complete genomeMolybdate-binding protein4e-1064.7
NC_014376:3547218:354839435483943549368975Clostridium saccharolyticum WM1 chromosome, complete genomeDNA binding domain protein, excisionase family1e-0963.2
NC_015676:109743:1097431097431116531911Methanosalsum zhilinae DSM 4017 chromosome, complete genomemolybdenum cofactor synthesis domain-containing protein2e-0858.5
NC_010364:3322:7576775767776621896Halobacterium salinarum R1, complete genomemolybdenum cofactor biosynthesis protein moeA21e-0756.2
NC_014098:1670327:1693767169376716949451179Bacillus tusciae DSM 2912 chromosome, complete genometranscriptional regulator of molybdate metabolism, XRE family2e-0652.4
NC_008701:37219:409354093541828894Pyrobaculum islandicum DSM 4184, complete genometranscriptional regulator of molybdate metabolism, LysR family5e-0650.8
NC_009952:592000:626365626365627237873Dinoroseobacter shibae DFL 12, complete genomeperiplasmic substrate-binding protein7e-0650.4