Pre_GI: BLASTP Hits

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Query: NC_012808:4235567:4240246 Methylobacterium extorquens AM1, complete genome

Start: 4240246, End: 4241037, Length: 792

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012988:4633930:463860746386074639398792Methylobacterium extorquens DM4, complete genomehypothetical protein5e-118423
NC_010172:4185904:419190041919004192691792Methylobacterium extorquens PA1, complete genomeprotein of unknown function DUF815e-118423
NC_011757:4293000:429544942954494296240792Methylobacterium chloromethanicum CM4, complete genomeprotein of unknown function DUF819e-117419
NC_012125:1360593:138650113865011387310810Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-40166
NC_012779:2619871:262328626232862624086801Edwardsiella ictaluri 93-146, complete genomehypothetical protein3e-38158
NC_014618:1452927:147452414745241475333810Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein2e-37155
NC_016513:1859767:187470318747031875470768Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeinner membrane protein YfcA4e-36151
NC_013416:1526920:153955315395531540320768Aggregatibacter actinomycetemcomitans D11S-1, complete genomeinner membrane protein YfcA4e-36151
NC_002505:2537655:254839525483952549180786Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein3e-32139
NC_009457:2095366:210162721016272102412786Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein3e-32139
NC_012578:2479150:248541124854112486196786Vibrio cholerae M66-2 chromosome I, complete sequenceputative Inner membrane protein3e-32139
NC_012582:2626786:263304726330472633832786Vibrio cholerae O395 chromosome chromosome I, complete sequenceputative Inner membrane protein3e-32139
NC_012668:1036000:104548610454861046271786Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein3e-32139
NC_016445:2012294:201855220185522019337786Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein3e-32139
NC_016944:2588435:259469325946932595478786Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein3e-32139
NC_017200:345502:351091351091351861771Bacillus thuringiensis serovar finitimus YBT-020 chromosome,hypothetical protein7e-24110
NC_016779:312500:318945318945319715771Bacillus cereus F837/76 chromosome, complete genomehypothetical protein2e-23109
NC_015733:3736104:373949737394973740327831Pseudomonas putida S16 chromosome, complete genomehypothetical protein8e-23107
NC_008027:2331617:235545623554562356217762Pseudomonas entomophila L48, complete genomehypothetical protein1e-22106
NC_010572:5445081:546529154652915466085795Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein2e-2099.8
NC_014210:2638773:263961626396162640383768Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,protein of unknown function DUF818e-2097.4
NC_015379:4630367:463117146311714631935765Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Conserved hypothetical protein, putative membrane protein1e-1997.4
NC_007164:622000:652500652500653294795Corynebacterium jeikeium K411, complete genomehypothetical protein1e-1996.7
NC_013959:1555799:157281115728111573578768Sideroxydans lithotrophicus ES-1 chromosome, complete genomeprotein of unknown function DUF814e-1995.1
NC_010674:3674739:367944636794463680195750Clostridium botulinum B str. Eklund 17B, complete genometransporter6e-1994.4
NC_010723:3530000:353662735366273537376750Clostridium botulinum E3 str. Alaska E43, complete genometransporter9e-1994
NC_015556:2265940:227547522754752276242768Pseudomonas fulva 12-X chromosome, complete genomeprotein of unknown function DUF812e-1892.8
NC_008577:3125675:314095731409573141730774Shewanella sp. ANA-3 chromosome 1, complete sequenceprotein of unknown function DUF812e-1892.8
NC_008322:2983951:300111730011173001890774Shewanella sp. MR-7, complete genomeprotein of unknown function DUF816e-1891.3
NC_008321:2922000:294043429404342941207774Shewanella sp. MR-4, complete genomeprotein of unknown function DUF816e-1891.3
NC_017068:130226:132382132382133146765Selenomonas ruminantium subsp. lactilytica TAM6421, completemembrane protein1e-1790.5
NC_019908:852230:869858869858870625768Brachyspira pilosicoli P43/6/78 chromosome, complete genometransporter membrane1e-1790.1
NC_014330:2409559:240955924095592410326768Brachyspira pilosicoli 95/1000 chromosome, complete genometransporter membrane2e-1789.7
NC_014012:3356629:337150033715003372273774Shewanella violacea DSS12, complete genomehypothetical protein5e-1788.2
NC_011663:3181579:320260832026083203381774Shewanella baltica OS223 chromosome, complete genomehypothetical protein8e-1787.4
NC_012668:1623350:165034316503431651119777Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein9e-1787.4
NC_009092:2902171:292448029244802925253774Shewanella loihica PV-4, complete genomeprotein of unknown function DUF813e-1582
NC_015276:1037862:104442710444271045206780Marinomonas mediterranea MMB-1 chromosome, complete genomeprotein of unknown function DUF815e-1581.6
NC_014815:5603000:561002456100245610743720Micromonospora sp. L5 chromosome, complete genomehypothetical protein2e-1479.7
NC_015677:285896:302473302473303231759Ramlibacter tataouinensis TTB310 chromosome, complete genomemembrane protein4e-1478.6
NC_010644:231486:234531234531235283753Elusimicrobium minutum Pei191, complete genomehypothetical protein8e-1477.4
NC_014391:3596812:361355136135513614270720Micromonospora aurantiaca ATCC 27029 chromosome, complete genomehypothetical protein2e-1376.6
NC_015434:3581001:359625935962593597038780Verrucosispora maris AB-18-032 chromosome, complete genomehypothetical protein2e-1272.8
NC_015437:697051:697051697051697809759Selenomonas sputigena ATCC 35185 chromosome, complete genomeprotein of unknown function DUF812e-1272.8
NC_003919:5056650:508042750804275081206780Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein3e-1272.4
NC_020209:945000:952807952807953370564Pseudomonas poae RE*1-1-14, complete genomehypothetical protein5e-1168.2
NC_013421:1143500:115253411525341153298765Pectobacterium wasabiae WPP163, complete genomeprotein of unknown function DUF818e-1064.3
NC_004547:1062410:106241010624101063174765Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein6e-0961.2
NC_011899:948790:964423964423965166744Halothermothrix orenii H 168, complete genomepredicted permease2e-0756.2
NC_019673:189487:189487189487190329843Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein1e-0653.9
NC_009718:643200:668532668532669269738Fervidobacterium nodosum Rt17-B1, complete genomehypothetical protein4e-0652