Pre_GI: BLASTP Hits

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Query: NC_012808:4235567:4238223 Methylobacterium extorquens AM1, complete genome

Start: 4238223, End: 4238540, Length: 318

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012988:4633930:463658646365864636903318Methylobacterium extorquens DM4, complete genome30S ribosomal protein S212e-31134
NC_010172:4185904:418987641898764190193318Methylobacterium extorquens PA1, complete genomeribosomal protein S212e-31134
NC_011757:4293000:429342642934264293743318Methylobacterium chloromethanicum CM4, complete genomeribosomal protein S212e-31134
NC_014217:3024961:304219630421963042474279Starkeya novella DSM 506 chromosome, complete genomeribosomal protein S212e-1890.9
NC_017249:1476500:147955814795581479836279Bradyrhizobium japonicum USDA 6, complete genome30S ribosomal protein S212e-1787.8
NC_020911:4428000:443196644319664432166201Octadecabacter antarcticus 307, complete genome30S ribosomal protein S21 A4e-1063.5
NC_007498:2618131:263420526342052634399195Pelobacter carbinolicus DSM 2380, complete genomeribosomal protein S213e-0960.5