Pre_GI Gene

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Host: NC_017249 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017249:1476500 Bradyrhizobium japonicum USDA 6, complete genome

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
14765801476837258hypothetical protein
14771131477358246hypothetical protein
14774731477820348hypothetical protein
14781671478433267hypothetical proteinBLASTP
14784261478722297hypothetical proteinBLASTP
14787841479062279hypothetical protein
1479558147983627930S ribosomal protein S21QuickGO ontologyBLASTP
14802871480496210cold shock proteinQuickGO ontologyBLASTP
14805931480835243hypothetical protein
14808911481106216hypothetical protein
14811211481303183hypothetical protein
14816151482553939hypothetical proteinBLASTP
14826191482993375hypothetical protein
14830121483821810hypothetical proteinBLASTP
14838821484121240hypothetical proteinBLASTP
14845991484835237hypothetical proteinBLASTP
14850951485295201hypothetical proteinBLASTP
148555914868391281hypothetical proteinBLASTP
14868871487303417hypothetical proteinBLASTP
14881701488367198hypothetical proteinBLASTP
14896211490085465hypothetical protein
14900901490800711hypothetical protein
14908071491364558hypothetical protein
14915021492110609hypothetical protein
149266514943411677hypothetical proteinBLASTP
14945321494747216hypothetical protein