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Query: NC_021182:4310900 Clostridium pasteurianum BC1, complete genome

Start: 4310900, End: 4330180, Length: 19281

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_021182:30041530041531873118317Clostridium pasteurianum BC1, complete genome3e-24121BLASTN svgBLASTP svg
NC_021182:43435143435145489320543Clostridium pasteurianum BC1, complete genome3e-21111BLASTN svgBLASTP svg
NC_021182:40880004088000411160223603Clostridium pasteurianum BC1, complete genome4e-20107BLASTN svgBLASTP svg
NC_021182:162236*16223618461322378Clostridium pasteurianum BC1, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_021182:2667408*2667408269011022703Clostridium pasteurianum BC1, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_021182:93000*9300014465551656Clostridium pasteurianum BC1, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_021182:20135002013500203160018101Clostridium pasteurianum BC1, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_021182:4602683*4602683462770125019Clostridium pasteurianum BC1, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_021182:2422226*2422226244735325128Clostridium pasteurianum BC1, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_021182:17617891761789178207920291Clostridium pasteurianum BC1, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_021182:19834561983456200518921734Clostridium pasteurianum BC1, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_021182:48824944882494490859926106Clostridium pasteurianum BC1, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_012108:1067876*1067876109927731402Desulfobacterium autotrophicum HRM2, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_021182:3525523*3525523356673741215Clostridium pasteurianum BC1, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_021182:10452181045218106369618479Clostridium pasteurianum BC1, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_021182:10095261009526103309923574Clostridium pasteurianum BC1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_018643:482676*48267650224119566Alpha proteobacterium HIMB5 chromosome, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_021182:2360500*2360500238564325144Clostridium pasteurianum BC1, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_021182:12456921245692126370418013Clostridium pasteurianum BC1, complete genome6e-0763.9BLASTN svgBLASTP svg