Pre_GI: BLASTP Hits

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Query: NC_017066:57571:76015 Rickettsia typhi str. TH1527 chromosome, complete genome

Start: 76015, End: 76737, Length: 723

Host Lineage: Rickettsia typhi; Rickettsia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This genus, like other Rickettsial organisms such as Neorickettsia and Anaplasma, is composed of obligate intracellular pathogens. The latter is composed of two organisms, Rickettsia prowazekii and Rickettsia typhi. The bacteria are transmitted via an insect, usually a tick, to a host organism, in this case humans, where they target endothelial cells and sometimes macrophages. They attach via an adhesin, rickettsial outer membrane protein A, and are internalized where they persist as cytoplasmically free organisms. Transovarial transmission (from mother to offspring) occurs in the invertebrate host. This organism causes murine typhus and is an obligate intracellular pathogen that infects both the flea vector and hosts such as human, rat, and mouse. R. prowazekii, and genomic comparisons demonstrate colinearity and similarity to the genome of that organism except for two independent inversions near the origin and terminus. In the flea vector, the bacterium penetrates the gut epithelial barrier and is found in the feces which become infective.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017062:61500:764327643277154723Rickettsia typhi str. B9991CWPP chromosome, complete genomeOmpW family outer-membrane protein4e-126450
NC_006142:57571:760157601576737723Rickettsia typhi str. Wilmington, complete genomeOmpW-like outer membrane protein4e-126450
NC_000963:83408:849048490485707804Rickettsia prowazekii str. Madrid E, complete genomehypothetical protein6e-113406
NC_017057:83415:849118491185642732Rickettsia prowazekii str. RpGvF24 chromosome, complete genomeOmpW family outer-membrane protein8e-113406
NC_017050:83406:849028490285633732Rickettsia prowazekii str. Katsinyian chromosome, complete genomeOmpW family outer-membrane protein8e-113406
NC_012633:98000:100212100212100946735Rickettsia africae ESF-5, complete genomeOmpW family outer-membrane protein9e-108389
NC_009882:100000:102387102387103121735Rickettsia rickettsii str. 'Sheila Smith', complete genomehypothetical outer-membrane protein2e-107388
NC_010263:100000:102386102386103120735Rickettsia rickettsii str. Iowa, complete genomehypothetical protein2e-107388
NC_016908:100000:102420102420103154735Rickettsia rickettsii str. Colombia chromosome, complete genomeOmpW family outer-membrane protein2e-107388
NC_016909:100000:102415102415103149735Rickettsia rickettsii str. Arizona chromosome, complete genomeOmpW family outer-membrane protein2e-107388
NC_016914:99184:102473102473103207735Rickettsia rickettsii str. Hino chromosome, complete genomeOmpW family outer-membrane protein2e-107388
NC_017044:80384:103326103326104063738Rickettsia parkeri str. Portsmouth chromosome, complete genomeOmpW family outer-membrane protein2e-106384
NC_017058:129474:131701131701132435735Rickettsia australis str. Cutlack chromosome, complete genomeOmpW family outer-membrane protein2e-106384
NC_009881:92929:962889628897022735Rickettsia akari str. Hartford, complete genomeOmpW family outer-membrane protein1e-105382
NC_017249:8283701:832714083271408327871732Bradyrhizobium japonicum USDA 6, complete genomeouter membrane protein7e-0754.3
NC_004463:1898648:192662119266211927211591Bradyrhizobium japonicum USDA 110, complete genomeouter membrane protein8e-0754.3