Pre_GI: BLASTP Hits

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Query: NC_016830:5994494:5994494 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 5994494, End: 5995864, Length: 1371

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:6023926:6023926602392660252961371Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative transport-related membrane protein0771
NC_020209:997385:1030363103036310317271365Pseudomonas poae RE*1-1-14, complete genomeputative amino acid transporter-like, membrane protein0672
NC_004129:4993974:4996112499611249974761365Pseudomonas fluorescens Pf-5, complete genomeethanolamine permease family protein0657
NC_016816:3917446:3937164393716439385281365Pantoea ananatis LMG 5342, complete genomeethanolamine permease2e-173609
NC_020064:521500:5463895463895477531365Serratia marcescens FGI94, complete genomeethanolamine:proton symporter, EAT family3e-173608
NC_007651:3719191:3738777373877737401861410Burkholderia thailandensis E264 chromosome I, complete sequenceethanolamine transporter2e-146519
NC_008825:2564965:2580509258050925818761368Methylibium petroleiphilum PM1, complete genomeethanolamine permease, putative3e-144511
NC_014734:183214:1854351854351868081374Paludibacter propionicigenes WB4 chromosome, complete genomeethanolamine transporter2e-69263
NC_016584:1998000:2021034202103420223981365Desulfosporosinus orientis DSM 765 chromosome, complete genomeethanolamine permease3e-66252
NC_009253:1381401:1385147138514713865501404Desulfotomaculum reducens MI-1 chromosome, complete genomeethanolamine transporter3e-56219
NC_010617:92000:99644996441010771434Kocuria rhizophila DC2201, complete genomeputative ethanolamine permease1e-44181
NC_017986:3283433:3301949330194933033971449Pseudomonas putida ND6 chromosome, complete genomeethanolamine transporter6e-44178
NC_013440:5944935:5946408594640859479071500Haliangium ochraceum DSM 14365, complete genomeethanolamine transproter4e-42172
NC_008269:428898:4464514464514479381488Rhodococcus sp. RHA1 plasmid pRHL1, complete sequenceethanolamine permease1e-40167
NC_009937:4090404:4094044409404440956001557Azorhizobium caulinodans ORS 571, complete genomeputative amino acid transporter6e-37155
NC_007645:6461267:6461267646126764627451479Hahella chejuensis KCTC 2396, complete genomeAmino acid transporters1e-36154
NC_014166:681290:7008697008697022871419Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeethanolamine transporter7e-36151
NC_013714:570329:5866345866345881271494Bifidobacterium dentium Bd1, complete genomeAmino acid permease8e-1789
NC_013929:2375613:2375613237561323771361524Streptomyces scabiei 87.22 chromosome, complete genomecationic amino acid transporter7e-1582
NC_021177:6662668:6682065668206566835881524Streptomyces fulvissimus DSM 40593, complete genomeCationic amino acid transporter1e-1378.2
NC_015953:5908467:5928294592829459297751482Streptomyces sp. SirexAA-E chromosome, complete genomeamino acid permease-associated protein7e-1375.5
NC_015703:4531578:4569046456904645705121467Runella slithyformis DSM 19594 chromosome, complete genomeamino acid permease-associated protein3e-1066.6
NC_003909:927955:9324259324259338281404Bacillus cereus ATCC 10987, complete genomeamino acid permease family protein5e-1066.2
NC_016510:1749967:1760146176014617615971452Flavobacterium columnare ATCC 49512 chromosome, complete genomeamino acid permease-associated protein2e-0964.3
NC_008148:2498000:2535628253562825370791452Rubrobacter xylanophilus DSM 9941, complete genomeamino acid permease-associated region4e-0963.2
NC_009725:692237:7451557451557465401386Bacillus amyloliquefaciens FZB42, complete genomeYfnA5e-0962.8
NC_019842:710308:7348617348617362461386Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,amino acid permease yhdG5e-0962.8
NC_020054:4161049:4198127419812741996051479Fibrella aestuarina BUZ 2 drat genomeamino acid permease-associated region1e-0861.6
NC_015873:450593:4673144673144686961383Megasphaera elsdenii DSM 20460, complete genomeamino acid permease1e-0861.6
NC_014041:4335948:4336509433650943378251317Zunongwangia profunda SM-A87 chromosome, complete genomeamino acid permease1e-0861.6
NC_014098:1670327:1678721167872116800311311Bacillus tusciae DSM 2912 chromosome, complete genomeamino acid permease-associated region2e-0861.2
NC_014328:2326930:2336082233608223374851404Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative aminoacid permease2e-0860.8
NC_010513:1443787:1466094146609414675451452Xylella fastidiosa M12 chromosome, complete genomecationic amino acid transporter3e-0860.1
NC_004193:375416:5182005182005196091410Oceanobacillus iheyensis HTE831, complete genomecationic amino acid transporter3e-0860.1
NC_010577:1456909:1479697147969714811871491Xylella fastidiosa M23, complete genomeamino acid permease-associated region4e-0860.1
NC_013062:627000:6270006270006286761677Flavobacteriaceae bacterium 3519-10, complete genomeAmino acid permease6e-0859.3
NC_012522:7837071:7856746785674678581641419Rhodococcus opacus B4, complete genomeputative amino acid transporter1e-0758.2
NC_014209:2204515:2204515220451522059301416Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,amino acid permease-associated region1e-0758.2
NC_007512:1459685:1479913147991314814061494Pelodictyon luteolum DSM 273, complete genomeamino acid permease2e-0757.8
NC_014158:1479313:1483296148329614847561461Tsukamurella paurometabola DSM 20162 chromosome, complete genomeamino acid permease-associated region3e-0757
NC_020054:2066510:2068313206831320698151503Fibrella aestuarina BUZ 2 drat genomeamino acid permease-associated region4e-0756.6
NC_017030:5785681:5808060580806058093371278Corallococcus coralloides DSM 2259 chromosome, complete genomeSerine/threonine exchanger5e-0756.2
NC_005362:1870620:1890385189038518917821398Lactobacillus johnsonii NCC 533, complete genomeamino acid transporter5e-0756.2
NC_010610:1385066:1408071140807114094981428Lactobacillus fermentum IFO 3956, complete genomeamino acid transport protein7e-0755.8
NC_008530:1775841:1794199179419917955961398Lactobacillus gasseri ATCC 33323, complete genomeAmino acid transporter9e-0755.5
NC_016047:4108910:4138467413846741398701404Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeamino-acid permease RocE1e-0655.1
NC_014479:3939183:3965227396522739666301404Bacillus subtilis subsp. spizizenii str. W23 chromosome, completearginine/ornithine/gamma-aminobutyrate permease1e-0654.7
NC_008261:381297:3812973812973826791383Clostridium perfringens ATCC 13124, complete genomeamino acid permease family protein1e-0654.7
NC_013504:1648551:1663848166384816652451398Lactobacillus johnsonii FI9785 chromosome, complete genomeamino acid permease2e-0654.3
NC_007426:1134937:1152857115285711542331377Natronomonas pharaonis DSM 2160, complete genometransporter 4 (probable substrates cationic amino acids)2e-0654.3
NC_009617:3360990:3372774337277433741531380Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeamino acid permease-associated protein3e-0653.9
NC_015634:2547144:2563967256396725653011335Bacillus coagulans 2-6 chromosome, complete genomeamino acid permease-associated protein2e-0653.9
NC_015145:1045264:1047727104772710490761350Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomeamino acid transporter2e-0653.9
NC_014103:2635695:2640702264070226420961395Bacillus megaterium DSM319 chromosome, complete genomeamino acid permease family protein4e-0653.1
NC_014019:2661000:2662028266202826634221395Bacillus megaterium QM B1551 chromosome, complete genomeamino acid permease family protein4e-0653.1
NC_007296:1762000:1772812177281217741551344Streptococcus pyogenes MGAS6180, complete genomeamino acid permease5e-0652.8
NC_018528:2034000:2046668204666820480201353Lactobacillus helveticus R0052 chromosome, complete genomeGamma-aminobutyrate permease related permease5e-0652.8
NC_009512:755658:7785077785077799461440Pseudomonas putida F1, complete genomeamino acid permease-associated region6e-0652.8