Pre_GI: BLASTP Hits

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Query: NC_016810:2027311:2045059 Salmonella enterica subsp. enterica serovar Typhimurium str

Start: 2045059, End: 2045604, Length: 546

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002937:255790:2580502580502591111062Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetail protein, putative6e-2097.1
NC_002937:2933000:2951774295177429528351062Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetail protein, putative4e-2097.4
NC_009436:2776410:2790564279056427916221059Enterobacter sp. 638, complete genomebaseplate J family protein3e-53207
NC_008563:2909945:2923831292383129248891059Escherichia coli APEC O1, complete genomebacteriophage V tail protein5e-53206
NC_009800:2049346:2070534207053420716821149Escherichia coli HS, complete genomeputative baseplate J protein8e-0650.1
NC_011750:2928990:2940628294062829416861059Escherichia coli IAI39 chromosome, complete genomeputative baseplate J-like phage protein4e-53207
NC_000913:1188999:120548312054831206145663Escherichia coli K12, complete genomee14 prophage; conserved protein4e-0754.3
NC_011742:2823000:2841141284114128421991059Escherichia coli S88 chromosome, complete genomebaseplate J-like phage protein4e-53206
NC_007946:2894793:2908804290880429098621059Escherichia coli UTI89, complete genomebacteriophage V tail protein4e-53206
AC_000091:1191353:120783712078371208499663Escherichia coli W3110 DNA, complete genomehypothetical protein4e-0754.3
NC_011740:621408:6234476234476245051059Escherichia fergusonii ATCC 35469, complete genomeputative baseplate J-like phage protein2e-53207
NC_011365:592256:6301736301736312641092Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomebaseplate J family protein8e-0960.1
NC_000907:1568867:1589241158924115903081068Haemophilus influenzae Rd KW20, complete genomehypothetical protein2e-1065.5
NC_002947:4362271:4384490438449043855331044Pseudomonas putida KT2440, complete genomephage FluMu protein gp472e-1168.2
NC_015733:1398083:1398968139896813999991032Pseudomonas putida S16 chromosome, complete genomephage FluMu protein gp471e-1168.9
NC_011205:2137696:2151528215152821526071080Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853tail protein1e-97355
NC_011294:2009388:2023221202322120243001080Salmonella enterica subsp. enterica serovar Enteritidis strphage protein1e-97355
NC_010102:1779707:1802789180278918038681080Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-97355
NC_011094:2115750:2130186213018621312651080Salmonella enterica subsp. enterica serovar Schwarzengrund strtail protein9e-98355
NC_017046:2026672:204442020444202044944525Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage protein9e-98355
NC_016863:2029340:204708820470882047612525Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein9e-98355
NC_008258:269806:2718452718452729031059Shigella flexneri 5 str. 8401, complete genomehypothetical protein5e-54210
NC_007712:1182518:1195147119514711962171071Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein2e-60231
NC_016628:373815:3959663959663970121047Vibrio furnissii NCTC 11218 chromosome 2, complete sequencephage protein8e-0960.1
NC_014228:3282500:3311254331125433123271074Xenorhabdus nematophila ATCC 19061, complete genomeputative bacteriophage protein7e-0960.1