Pre_GI: BLASTP Hits

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Query: NC_014614:6115:10829 Clostridium sticklandii, complete genome

Start: 10829, End: 11149, Length: 321

Host Lineage: Clostridium sticklandii; Clostridium; unclassified Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: This Clostridium (HF strain, ATCC 12662) was initially found associated with Methanococcus vannieli in formate-enriched cultures. After its isolation in pure culture, it was shown that this organism is capable of fermenting amino acids. Biochemical studies have shown that C. sticklandii obtains energy for growth from oxidation-reduction reactions between specific amino acid pairs. Clostridium sticklandii is a Gram-positive bacterium with low (G +C) content that is capable of fermenting amino acids.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009922:1:949694969813318Alkaliphilus oremlandii OhILAs, complete genomeanti-sigma-factor antagonist2e-23107
NC_009089:1:913591359446312Clostridium difficile 630, complete genomeanti-sigma-B factor antagonist2e-22104
NC_011898:426951:451241451241451558318Clostridium cellulolyticum H10, complete genomeanti-sigma-factor antagonist8e-1992.4
NC_009012:3421000:342499434249943425308315Clostridium thermocellum ATCC 27405, complete genomeanti-sigma-factor antagonist1e-1685.1
NC_018664:1:915791579474318Clostridium acidurici 9a chromosome, complete genomeanti-sigma F factor antagonist SpoIIAA5e-1683.2
NC_014165:27246:439594395944309351Thermobispora bispora DSM 43833 chromosome, complete genomeanti-sigma-factor antagonist8e-1372.4
NC_012121:1578190:159507715950771595403327Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative anti-sigmaB factor antagonist3e-1270.5
NC_014219:567033:568111568111568440330Bacillus selenitireducens MLS10 chromosome, complete genomeanti-sigma-factor antagonist1e-1168.6
NC_009616:1604276:161012816101281610460333Thermosipho melanesiensis BI429 chromosome, complete genomeanti-sigma-factor antagonist1e-1168.6
NC_010572:3878660:388229938822993882652354Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative anti-sigma factor antagonist4e-1167
NC_016114:3938721:395672339567233957076354Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeanti-sigma-factor antagonist4e-1167
NC_004193:375416:375416375416675301299886Oceanobacillus iheyensis HTE831, complete genome5e-1166.6
NC_003155:5616000:563159856315985631939342Streptomyces avermitilis MA-4680, complete genomeanti-sigma factor antagonist5e-1166.2
NC_018704:347948:351469351469351807339Amphibacillus xylanus NBRC 15112, complete genomeanti-sigma B factor antagonist8e-1165.9
NC_021177:7870464:789028478902847890640357Streptomyces fulvissimus DSM 40593, complete genomeStage II sporulation protein1e-1065.1
NC_006582:883922:885435885435885764330Bacillus clausii KSM-K16, complete genomepositive regulator of sigma-B activity2e-1064.7
NC_017195:2273216:229334422933442293697354Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeanti-sigma F factor antagonist3e-1063.9
NC_004193:375416:655040655040655372333Oceanobacillus iheyensis HTE831, complete genomepositive regulator of sigma-B activity7e-1062.4
NC_013595:480000:498355498355498705351Streptosporangium roseum DSM 43021, complete genomeputative anti-anti-sigma regulatory factor1e-0962
NC_010556:2773396:279425227942522794578327Exiguobacterium sibiricum 255-15, complete genomeanti-sigma-factor antagonist1e-0961.6
NC_016593:2370000:239146523914652391815351Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeanti-sigma F factor antagonist2e-0961.2
NC_018665:2563375:258405825840582584384327Exiguobacterium antarcticum B7 chromosome, complete genomeanti-sigma-factor antagonist2e-0961.2
NC_012673:2023297:202642320264232026749327Exiguobacterium sp. AT1b, complete genomeanti-sigma-factor antagonist3e-0960.8
NC_000964:521975:521649521649521978330Bacillus subtilis subsp. subtilis str. 168, complete genomeanti-anti-sigma factor (antagonist of RsbW)5e-0856.6
NC_019896:3491000:351845435184543518783330Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeAnti-anti-sigma-B factor5e-0856.6
NC_014976:2735423:273649227364922736821330Bacillus subtilis BSn5 chromosome, complete genomeanti-anti-sigma factor (antagonist of RsbW)5e-0856.6
NC_012225:2474042:248566824856682486003336Brachyspira hyodysenteriae WA1, complete genomeanti-sigma factor antagonist5e-0856.6
NC_014479:509919:509919509919510248330Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeanti-anti-sigma factor (antagonist of RsbW)6e-0856.2
NC_016047:637778:638847638847639176330Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeanti-sigma-B factor antagonist8e-0855.8
NC_015589:3085442:308925730892573089595339Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeanti-sigma F factor antagonist1e-0755.5
NC_009454:1246393:126467812646781265025348Pelotomaculum thermopropionicum SI, complete genomeanti-anti-sigma regulatory factor1e-0755.1
NC_019908:21970:317813178132116336Brachyspira pilosicoli P43/6/78 chromosome, complete genomeanti sigma factor antagonist1e-0652.4
NC_014330:609982:633256633256633591336Brachyspira pilosicoli 95/1000 chromosome, complete genomeanti sigma factor antagonist1e-0652.4
NC_018604:2053585:207966620796662080001336Brachyspira pilosicoli WesB complete genomeanti sigma factor antagonist1e-0652.4
NC_018607:805966:812483812483812818336Brachyspira pilosicoli B2904 chromosome, complete genomeanti sigma factor antagonist1e-0652.4
NC_004460:1237129:125657912565791256878300Vibrio vulnificus CMCP6 chromosome II, complete sequenceAnti-anti-sigma regulatory factor1e-0652
NC_005140:1820970:184089418408941841193300Vibrio vulnificus YJ016 chromosome II, complete sequenceanti-anti-sigma regulatory factor1e-0652
NC_009725:496443:496443496443496772330Bacillus amyloliquefaciens FZB42, complete genomeRsbV2e-0651.2
NC_019842:484933:484607484607484936330Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,anti-sigma B factor antagonist2e-0651.2
NC_020410:495184:495184495184495513330Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeanti-anti-sigma factor (antagonist of RsbW)2e-0651.2
NC_011729:4073761:407376140737614074090330Cyanothece sp. PCC 7424 chromosome, complete genomeanti-sigma-factor antagonist2e-0651.2
NC_013171:1:861286128917306Anaerococcus prevotii DSM 20548, complete genomeanti-sigma-factor antagonist2e-0650.8
NC_013790:85889:102725102725103024300Methanobrevibacter ruminantium M1 chromosome, complete genomeanti-sigma factor antagonist2e-0650.8
NC_012881:3727150:374323537432353743564330Desulfovibrio salexigens DSM 2638, complete genomeanti-sigma-factor antagonist3e-0650.8
NC_015714:238891:239788239788240333546Treponema paraluiscuniculi Cuniculi A chromosome, complete genomeanti sigma factor antagonist4e-0650.1
NC_010814:2217153:224222722422272242562336Geobacter lovleyi SZ, complete genomeanti-sigma-factor antagonist7e-0649.3
NC_017191:467207:467207467207467536330Bacillus amyloliquefaciens XH7 chromosome, complete genomeanti-anti-sigma factor8e-0649.3
NC_017190:466236:465910465910466239330Bacillus amyloliquefaciens LL3 chromosome, complete genomeanti-anti-sigma factor8e-0649.3
NC_017188:461177:461177461177461506330Bacillus amyloliquefaciens TA208 chromosome, complete genomeanti-anti-sigma factor8e-0649.3
NC_014551:483773:483773483773484102330Bacillus amyloliquefaciens DSM 7, complete genomeanti-anti-sigma factor (antagonist of RsbW)8e-0649.3