Pre_GI: BLASTP Hits

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Query: NC_014169:1442435:1452669 Bifidobacterium longum subsp. longum JDM301 chromosome, complete

Start: 1452669, End: 1454462, Length: 1794

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009089:1283000:1310925131092513127121788Clostridium difficile 630, complete genomeputative conjugal transfer protein0838
NC_018867:10238:2579025790275651776Dehalobacter sp. CF chromosome, complete genomehypothetical protein0761
NC_009089:478328:4830724830724848561785Clostridium difficile 630, complete genomeputative conjugal transfer protein0692
NC_004668:2198027:2252661225266122544361776Enterococcus faecalis V583, complete genomeTraG family protein0656
NC_016630:434500:4471844471844489441761Filifactor alocis ATCC 35896 chromosome, complete genomeTraG family protein9e-178623
NC_014376:317312:3184953184953203271833Clostridium saccharolyticum WM1 chromosome, complete genome2e-174612
NC_009706:238160:2571792571792590111833Clostridium kluyveri DSM 555 chromosome, complete genomeplasmid transfer factor-like protein4e-174612
NC_011837:238160:2571792571792590711893Clostridium kluyveri NBRC 12016, complete genomehypothetical protein7e-174610
NC_015977:3324000:3330762333076233318021041Roseburia hominis A2-183 chromosome, complete genomeconjugal transfer protein1e-112407
NC_012781:2552723:2567773256777325690801308Eubacterium rectale ATCC 33656, complete genomeATPase involved in conjugal plasmid transfer3e-100366
NC_012781:700226:7296797296797309861308Eubacterium rectale ATCC 33656, complete genomeATPase involved in conjugal plasmid transfer3e-100366
NC_008023:1070986:1082250108225010840431794Streptococcus pyogenes MGAS2096, complete genomeTraG/TraD family4e-97356
NC_014246:57021:8101881018828591842Mobiluncus curtisii ATCC 43063 chromosome, complete genomeTraG/TraD family protein2e-89330
NC_015977:3424178:3507521350752135096982178Roseburia hominis A2-183 chromosome, complete genomeTraG/TraD family protein9e-86318
NC_015052:1313311:1349250134925013510851836Bifidobacterium longum subsp. infantis 157F, complete genomehypothetical protein2e-82306
NC_004116:1276791:1304689130468913065061818Streptococcus agalactiae 2603V/R, complete genome2e-71270
NC_020450:1254849:1254849125484912567051857Lactococcus lactis subsp. lactis IO-1 DNA, complete genomeconjugal transfer protein TraD2e-62240
NC_004368:1160535:1173758117375811758182061Streptococcus agalactiae NEM316, complete genomehypothetical protein5e-60232
NC_016048:2343500:234786723478672348670804Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein5e-52206
NC_012781:700226:733231733231733884654Eubacterium rectale ATCC 33656, complete genomeTraG protein8e-52205
NC_012781:2552723:256487525648752565528654Eubacterium rectale ATCC 33656, complete genomeTraG protein8e-52205
NC_007644:362000:3679313679313699161986Moorella thermoacetica ATCC 39073, complete genomeTRAG protein1e-51204
NC_003869:1971766:1982399198239919844022004Thermoanaerobacter tengcongensis MB4, complete genomeATPase involved in conjugal plasmid transfer7e-51202
NC_006087:765081:7678797678797697231845Leifsonia xyli subsp. xyli str. CTCB07, complete genomeconjugal plasmid transfer, ATPase6e-46186
NC_012654:170956:1875941875941895401947Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequenceATPase involved in conjugal plasmid transfer2e-43177
NC_015589:3813415:3815476381547638174491974Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeTRAG family protein8e-43175
NC_014652:379833:3913543913543932311878Caldicellulosiruptor hydrothermalis 108 chromosome, completetrag family protein9e-40165
NC_012034:2623252:2641160264116026430371878Anaerocellum thermophilum DSM 6725, complete genomeTRAG family protein7e-39162
NC_014721:2201790:2213725221372522156381914Caldicellulosiruptor kristjanssonii 177R1B chromosome, completetrag family protein8e-39162
NC_015603:1:1070110701122211521Lactobacillus kefiranofaciens ZW3 plasmid pWW2, complete sequenceprotein Trs2e-38160
NC_012891:1277966:129077812907781291107330Streptococcus dysgalactiae subsp. equisimilis GGS_124 chromosome 1,hypothetical protein2e-36154
NC_009437:2815500:2820624282062428225101887Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeTRAG family protein1e-35151
NC_009437:1556934:1568309156830915701471839Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeTRAG family protein1e-34148
NC_009253:1031799:1031799103179910345372739Desulfotomaculum reducens MI-1 chromosome, complete genomeTRAG family protein2e-28127
NC_014964:35862:4889248892507241833Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeTRAG family protein2e-26120
NC_010321:35855:4888548885507171833Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeTRAG family protein2e-26120
NC_011593:1202726:121828412182841218889606Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,7e-25115
NC_010337:616304:6198006198006216201821Heliobacterium modesticaldum Ice1, complete genometrag/trad family protein, putative1e-22108
NC_014376:3009403:3033976303397630358231848Clostridium saccharolyticum WM1 chromosome, complete genomeTRAG family protein1e-20102
NC_014624:1768226:1806146180614618082632118Eubacterium limosum KIST612 chromosome, complete genomeTraG/TraD family protein3e-20100
NC_017219:1203500:121807512180751218491417Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein3e-1997.4
NC_013766:1835964:1851550185155018533521803Listeria monocytogenes 08-5578 chromosome, complete genometype IV secretion system protein VirD44e-1997.1
NC_013768:1802313:1818281181828118200831803Listeria monocytogenes 08-5923, complete genometype IV secretion system protein VirD44e-1997.1
NC_011837:3814000:3839101383910138409031803Clostridium kluyveri NBRC 12016, complete genomehypothetical protein6e-1996.3
NC_009706:3882500:3907598390759839094001803Clostridium kluyveri DSM 555 chromosome, complete genomeTraG-like protein6e-1996.3
NC_016048:4163225:4199650419965042014521803Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein2e-1894.7
NC_016791:3891272:3914625391462539164421818Clostridium sp. BNL1100 chromosome, complete genometype IV secretory pathway, VirD4 component2e-1894.4
NC_018870:757416:7824677824677843051839Thermacetogenium phaeum DSM 12270 chromosome, complete genomeTRAG-like protein7e-1892.8
NC_016791:3953972:3982848398284839846681821Clostridium sp. BNL1100 chromosome, complete genometype IV secretory pathway, VirD4 component3e-1790.5
NC_018866:1279000:1282227128222712840471821Dehalobacter sp. DCA chromosome, complete genomeTRAG family protein3e-1790.5
NC_018867:1357540:1360767136076713625871821Dehalobacter sp. CF chromosome, complete genomeTRAG family protein3e-1790.5
NC_007907:960104:1031622103162210334421821Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-1790.9
NC_007907:5185510:5263303526330352651201818Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-1687.8
NC_021184:3533500:3549757354975735515741818Desulfotomaculum gibsoniae DSM 7213, complete genometype IV secretory pathway, VirD4 component2e-1584.7
NC_009253:897684:8991758991759012232049Desulfotomaculum reducens MI-1 chromosome, complete genomeTRAG family protein3e-1480.9
NC_010999:561914:5862825862825887412460Lactobacillus casei, complete genomeTRAG protein precursor3e-1377
NC_016052:2038000:2040338204033820425752238Tetragenococcus halophilus NBRC 12172, complete genomehypothetical protein6e-1376.3
NC_016814:18000:3264032640347392100Sinorhizobium fredii HH103 plasmid pSfHH103c complete sequenceProtein virD41e-0965.1
NC_007930:99693:1020071020071048712865Lactobacillus salivarius subsp. salivarius UCC118 plasmid pMP118,Conjugation-related ATPase3e-0860.5
NC_012891:1277966:129665412966541296992339Streptococcus dysgalactiae subsp. equisimilis GGS_124 chromosome 1,hypothetical protein3e-0860.8
NC_014921:879228:9029359029359051542220Mycoplasma fermentans M64 chromosome, complete genomehypothetical protein1e-0758.9
NC_014921:481559:5049995049995072182220Mycoplasma fermentans M64 chromosome, complete genomehypothetical protein1e-0758.9
NC_014414:1104386:1109337110933711111751839Parvularcula bermudensis HTCC2503 chromosome, complete genomehypothetical protein1e-0758.9
NC_007798:652317:6585716585716604961926Neorickettsia sennetsu str. Miyayama, complete genometype IV secretion system protein VirD44e-0757
NC_014921:830334:8366318366318388502220Mycoplasma fermentans M64 chromosome, complete genomehypothetical protein6e-0756.6
NC_011987:53760:5376053760561232364Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequenceTRAG protein6e-0756.2
NC_014332:1:1291112911147281818Bacillus cereus biovar anthracis str. CI plasmid pCI-XO2, completeTraG/TraF family conjugation protein3e-0653.9
NC_007323:1:1188811888137231836Bacillus anthracis str. 'Ames Ancestor' plasmid pXO2, completeconjugation protein, trag/trad family, (pxo2-16)3e-0653.9