Query: NC_013714:1028569 Bifidobacterium dentium Bd1, complete genome
Start: 1028569, End: 1048599, Length: 20031
Host Lineage: Bifidobacterium dentium; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria
General Information: Common oral and gut bacterium. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium dentium species represents over forty strains which were isolated from human dental caries and human feces.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_008260:1044440* | 1044440 | 1062651 | 18212 | Alcanivorax borkumensis SK2, complete genome | 2e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_018691:1864796* | 1864796 | 1904453 | 39658 | Alcanivorax dieselolei B5 chromosome, complete genome | 2e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_011886:1891077* | 1891077 | 1924599 | 33523 | Arthrobacter chlorophenolicus A6, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_018531:1900619* | 1900619 | 1941817 | 41199 | Arthrobacter sp. Rue61a chromosome, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_013714:1048783 | 1048783 | 1067099 | 18317 | Bifidobacterium dentium Bd1, complete genome | 4e-39 | 170 | BLASTN svg | BLASTP svg |
NC_015671:1950081 | 1950081 | 1972276 | 22196 | Cellvibrio gilvus ATCC 13127 chromosome, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_015856:3675592* | 3675592 | 3700018 | 24427 | Collimonas fungivorans Ter331 chromosome, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_004369:1552847 | 1552847 | 1571599 | 18753 | Corynebacterium efficiens YS-314, complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
AP010958:867869 | 867869 | 890607 | 22739 | Escherichia coli O103:H2 str. 12009 DNA, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_002655:919654 | 919654 | 939566 | 19913 | Escherichia coli O157:H7 EDL933, complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_002695:917509 | 917509 | 940398 | 22890 | Escherichia coli O157:H7 str. Sakai, complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_009138:2242470* | 2242470 | 2272537 | 30068 | Herminiimonas arsenicoxydans, complete genome | 2e-19 | 105 | BLASTN svg | BLASTP svg |
NC_014830:1871135* | 1871135 | 1901864 | 30730 | Intrasporangium calvum DSM 43043 chromosome, complete genome | 4e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_013922:2110894 | 2110894 | 2132490 | 21597 | Natrialba magadii ATCC 43099 chromosome, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_014935:1999653* | 1999653 | 2031694 | 32042 | Nitratifractor saLSUginis DSM 16511 chromosome, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_014483:4740214* | 4740214 | 4764099 | 23886 | Paenibacillus polymyxa E681 chromosome, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_012917:1740542 | 1740542 | 1766929 | 26388 | Pectobacterium carotovorum subsp. carotovorum PC1, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_002516:3519000 | 3519000 | 3545074 | 26075 | Pseudomonas aeruginosa PAO1, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_014924:936158* | 936158 | 963525 | 27368 | Pseudoxanthomonas suwonensis 11-1 chromosome, complete genome | 2e-19 | 105 | BLASTN svg | BLASTP svg |
NC_019673:7400817 | 7400817 | 7421369 | 20553 | Saccharothrix espanaensis DSM 44229 complete genome | 4e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_003155:7453994 | 7453994 | 7481642 | 27649 | Streptomyces avermitilis MA-4680, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_021177:1736854 | 1736854 | 1776599 | 39746 | Streptomyces fulvissimus DSM 40593, complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_015957:8103472* | 8103472 | 8128580 | 25109 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_019897:209523 | 209523 | 234396 | 24874 | Thermobacillus composti KWC4 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_011901:1860887 | 1860887 | 1912103 | 51217 | Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_003919:3060484* | 3060484 | 3099719 | 39236 | Xanthomonas axonopodis pv. citri str. 306, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_007086:1936505 | 1936505 | 1978099 | 41595 | Xanthomonas campestris pv. campestris str. 8004, complete genome | 7e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_003902:2933121 | 2933121 | 2959869 | 26749 | Xanthomonas campestris pv. campestris str. ATCC 33913, complete | 7e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_010688:1908012 | 1908012 | 1964744 | 56733 | Xanthomonas campestris pv. campestris, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_007508:3183631 | 3183631 | 3220682 | 37052 | Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_006834:3422985* | 3422985 | 3444222 | 21238 | Xanthomonas oryzae pv. oryzae KACC10331, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_007705:3429493* | 3429493 | 3453390 | 23898 | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_013530:1649214 | 1649214 | 1681587 | 32374 | Xylanimonas cellulosilytica DSM 15894, complete genome | 5e-23 | 117 | BLASTN svg | BLASTP svg |