Pre_GI: BLASTN Hits

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Query: NC_013714:1028569 Bifidobacterium dentium Bd1, complete genome

Start: 1028569, End: 1048599, Length: 20031

Host Lineage: Bifidobacterium dentium; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Common oral and gut bacterium. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium dentium species represents over forty strains which were isolated from human dental caries and human feces.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008260:1044440*1044440106265118212Alcanivorax borkumensis SK2, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_018691:1864796*1864796190445339658Alcanivorax dieselolei B5 chromosome, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_011886:1891077*1891077192459933523Arthrobacter chlorophenolicus A6, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_018531:1900619*1900619194181741199Arthrobacter sp. Rue61a chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013714:10487831048783106709918317Bifidobacterium dentium Bd1, complete genome4e-39170BLASTN svgBLASTP svg
NC_015671:19500811950081197227622196Cellvibrio gilvus ATCC 13127 chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_015856:3675592*3675592370001824427Collimonas fungivorans Ter331 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_004369:15528471552847157159918753Corynebacterium efficiens YS-314, complete genome6e-1073.8BLASTN svgBLASTP svg
AP010958:86786986786989060722739Escherichia coli O103:H2 str. 12009 DNA, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_002655:91965491965493956619913Escherichia coli O157:H7 EDL933, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_002695:91750991750994039822890Escherichia coli O157:H7 str. Sakai, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_009138:2242470*2242470227253730068Herminiimonas arsenicoxydans, complete genome2e-19105BLASTN svgBLASTP svg
NC_014830:1871135*1871135190186430730Intrasporangium calvum DSM 43043 chromosome, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_013922:21108942110894213249021597Natrialba magadii ATCC 43099 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014935:1999653*1999653203169432042Nitratifractor saLSUginis DSM 16511 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014483:4740214*4740214476409923886Paenibacillus polymyxa E681 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_012917:17405421740542176692926388Pectobacterium carotovorum subsp. carotovorum PC1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_002516:35190003519000354507426075Pseudomonas aeruginosa PAO1, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_014924:936158*93615896352527368Pseudoxanthomonas suwonensis 11-1 chromosome, complete genome2e-19105BLASTN svgBLASTP svg
NC_019673:74008177400817742136920553Saccharothrix espanaensis DSM 44229 complete genome4e-1487.7BLASTN svgBLASTP svg
NC_003155:74539947453994748164227649Streptomyces avermitilis MA-4680, complete genome9e-0660BLASTN svgBLASTP svg
NC_021177:17368541736854177659939746Streptomyces fulvissimus DSM 40593, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_015957:8103472*8103472812858025109Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_019897:20952320952323439624874Thermobacillus composti KWC4 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_011901:18608871860887191210351217Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete2e-0765.9BLASTN svgBLASTP svg
NC_003919:3060484*3060484309971939236Xanthomonas axonopodis pv. citri str. 306, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_007086:19365051936505197809941595Xanthomonas campestris pv. campestris str. 8004, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_003902:29331212933121295986926749Xanthomonas campestris pv. campestris str. ATCC 33913, complete7e-1693.7BLASTN svgBLASTP svg
NC_010688:19080121908012196474456733Xanthomonas campestris pv. campestris, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007508:31836313183631322068237052Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_006834:3422985*3422985344422221238Xanthomonas oryzae pv. oryzae KACC10331, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_007705:3429493*3429493345339023898Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_013530:16492141649214168158732374Xylanimonas cellulosilytica DSM 15894, complete genome5e-23117BLASTN svgBLASTP svg