Pre_GI: BLASTN Hits

Some Help

Query: NC_011205:4761598 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 4761598, End: 4784355, Length: 22758

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010468:40594364059436408235622921Escherichia coli ATCC 8739, complete genome02097BLASTN svgBLASTP svg
NC_012880:10914861091486111695125466Dickeya dadantii Ech703, complete genome01199BLASTN svgBLASTP svg
NC_015567:547500*54750057779630297Serratia sp. AS9 chromosome, complete genome01195BLASTN svgBLASTP svg
NC_015566:547387*54738757761030224Serratia sp. AS12 chromosome, complete genome01195BLASTN svgBLASTP svg
NC_009832:622969*62296965041627448Serratia proteamaculans 568, complete genome01130BLASTN svgBLASTP svg
NC_012779:996879996879102037523497Edwardsiella ictaluri 93-146, complete genome2e-81311BLASTN svgBLASTP svg
NC_014500:30717643071764309400622243Dickeya dadantii 3937 chromosome, complete genome1e-60242BLASTN svgBLASTP svg
NC_014216:1197704*1197704122880631103Desulfurivibrio alkaliphilus AHT2 chromosome, complete genome3e-55224BLASTN svgBLASTP svg
NC_013508:35930003593000361400721008Edwardsiella tarda EIB202, complete genome6e-38167BLASTN svgBLASTP svg
NC_012779:36527373652737367609923363Edwardsiella ictaluri 93-146, complete genome1e-36163BLASTN svgBLASTP svg
NC_012917:29717022971702299359921898Pectobacterium carotovorum subsp. carotovorum PC1, complete genome2e-34155BLASTN svgBLASTP svg
NC_013194:10401971040197105886218666Candidatus Accumulibacter phosphatis clade IIA str. UW-1, complete9e-34153BLASTN svgBLASTP svg
NC_015856:4975815*4975815499935023536Collimonas fungivorans Ter331 chromosome, complete genome4e-33151BLASTN svgBLASTP svg
NC_013592:1668092*1668092170683538744Dickeya dadantii Ech586, complete genome1e-32149BLASTN svgBLASTP svg
NC_012779:26648492664849268361918771Edwardsiella ictaluri 93-146, complete genome4e-30141BLASTN svgBLASTP svg
NC_013421:20040882004088202439520308Pectobacterium wasabiae WPP163, complete genome1e-29139BLASTN svgBLASTP svg
NC_012880:24800002480000249810318104Dickeya dadantii Ech703, complete genome2e-25125BLASTN svgBLASTP svg
NC_012912:777592*77759280009922508Dickeya zeae Ech1591, complete genome2e-25125BLASTN svgBLASTP svg
NC_008752:27249772724977274618021204Acidovorax avenae subsp. citrulli AAC00-1, complete genome3e-24121BLASTN svgBLASTP svg
NC_008825:27006172700617271935418738Methylibium petroleiphilum PM1, complete genome1e-23119BLASTN svgBLASTP svg
NC_008752:46656994665699468808622388Acidovorax avenae subsp. citrulli AAC00-1, complete genome1e-23119BLASTN svgBLASTP svg
NC_020260:1111130*1111130113509923970Cronobacter sakazakii Sp291, complete genome5e-23117BLASTN svgBLASTP svg
NC_009778:10700001070000109309923100Enterobacter sakazakii ATCC BAA-894, complete genome5e-23117BLASTN svgBLASTP svg
NC_013421:4714478*4714478478002665549Pectobacterium wasabiae WPP163, complete genome1e-20109BLASTN svgBLASTP svg
NC_012917:23627252362725238725724533Pectobacterium carotovorum subsp. carotovorum PC1, complete genome1e-20109BLASTN svgBLASTP svg
NC_008061:25820002582000260842826429Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence5e-20107BLASTN svgBLASTP svg
NC_008543:26668462666846268814221297Burkholderia cenocepacia HI2424 chromosome 2, complete sequence5e-20107BLASTN svgBLASTP svg
NC_015563:3786192*3786192382040734216Delftia sp. Cs1-4 chromosome, complete genome5e-20107BLASTN svgBLASTP svg
NC_013282:18424121842412187000127590Cronobacter turicensis, complete genome2e-19105BLASTN svgBLASTP svg
NC_010067:1300606*1300606132180421199Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete2e-19105BLASTN svgBLASTP svg
NC_006350:3957454*3957454398298825535Burkholderia pseudomallei K96243 chromosome 1, complete sequence8e-19103BLASTN svgBLASTP svg
NC_007434:111607*11160713392422318Burkholderia pseudomallei 1710b chromosome I, complete sequence8e-19103BLASTN svgBLASTP svg
NC_009074:3791232*3791232381784126610Burkholderia pseudomallei 668 chromosome I, complete sequence8e-19103BLASTN svgBLASTP svg
NC_012721:10950010950012980920310Burkholderia glumae BGR1 chromosome 2, complete genome8e-19103BLASTN svgBLASTP svg
NC_012880:1765920*1765920184383077911Dickeya dadantii Ech703, complete genome8e-19103BLASTN svgBLASTP svg
NC_015376:17528831752883177658023698Burkholderia gladioli BSR3 chromosome chromosome 2, complete8e-19103BLASTN svgBLASTP svg
NC_013722:15778181577818160047922662Xanthomonas albilineans, complete genome3e-18101BLASTN svgBLASTP svg
NC_003296:16969581696958171877421817Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete3e-18101BLASTN svgBLASTP svg
NC_003295:3688000*3688000372599938000Ralstonia solanacearum GMI1000, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_010515:16784871678487173009951613Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence1e-1799.6BLASTN svgBLASTP svg
NC_008391:63999663999666160321608Burkholderia cepacia AMMD chromosome 2, complete sequence5e-1797.6BLASTN svgBLASTP svg
NC_003296:61200061200063500323004Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete2e-1695.6BLASTN svgBLASTP svg
NC_007511:13009781300978132645425477Burkholderia sp. 383 chromosome 2, complete sequence2e-1695.6BLASTN svgBLASTP svg
NC_009076:3876733*3876733389976123029Burkholderia pseudomallei 1106a chromosome I, complete sequence2e-1695.6BLASTN svgBLASTP svg
NC_012791:72181372181376114739335Variovorax paradoxus S110 chromosome 1, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_013282:37811493781149380484323695Cronobacter turicensis, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_014121:20906302090630212903438405Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete2e-1695.6BLASTN svgBLASTP svg
NC_014323:3292082*3292082331943527354Herbaspirillum seropedicae SmR1 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_010002:37853133785313380809922787Delftia acidovorans SPH-1, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_012721:24000024000026711727118Burkholderia glumae BGR1 chromosome 2, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_012724:26110002611000263159920600Burkholderia glumae BGR1 chromosome 1, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_015138:42467874246787426900822222Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete3e-1591.7BLASTN svgBLASTP svg
NC_012721:24068742406874243009923226Burkholderia glumae BGR1 chromosome 2, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_014500:31752833175283321401838736Dickeya dadantii 3937 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_014306:49013904901390494640145012Erwinia billingiae Eb661, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_008752:4747376*4747376477161024235Acidovorax avenae subsp. citrulli AAC00-1, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_012912:1788308*1788308184662758320Dickeya zeae Ech1591, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_013592:1730505*1730505176316532661Dickeya dadantii Ech586, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_014910:42072274207227422797420748Alicycliphilus denitrificans BC chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_012489:20901620901623761528600Gemmatimonas aurantiaca T-27, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_010943:14268851426885145859931715Stenotrophomonas maltophilia K279a, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_002946:10201751020175106499344819Neisseria gonorrhoeae FA 1090, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_003197:17132591713259173659923341Salmonella typhimurium LT2, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_006351:16317601631760165459922840Burkholderia pseudomallei K96243 chromosome 2, complete sequence3e-1281.8BLASTN svgBLASTP svg
NC_007435:30593730593732993724001Burkholderia pseudomallei 1710b chromosome II, complete sequence3e-1281.8BLASTN svgBLASTP svg
NC_009078:15785001578500160125422755Burkholderia pseudomallei 1106a chromosome II, complete sequence3e-1281.8BLASTN svgBLASTP svg
NC_009792:36653693665369370602240654Citrobacter koseri ATCC BAA-895, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_014121:45773244577324460113023807Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete3e-1281.8BLASTN svgBLASTP svg
NC_014323:27327273274647019144Herbaspirillum seropedicae SmR1 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_008392:66600066600068894522946Burkholderia cepacia AMMD chromosome 3, complete sequence1e-1179.8BLASTN svgBLASTP svg
NC_008752:4086283*4086283411381327531Acidovorax avenae subsp. citrulli AAC00-1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_012214:20190002019000204685227853Erwinia pyrifoliae Ep1/96, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_012723:71637716379733525699Burkholderia glumae BGR1 plasmid bglu_1p, complete sequence1e-1179.8BLASTN svgBLASTP svg
NC_014117:442616*44261651580273187Burkholderia sp. CCGE1002 chromosome chromosome 1, complete1e-1179.8BLASTN svgBLASTP svg
NC_003295:21117302111730213127819549Ralstonia solanacearum GMI1000, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_014733:2201485*2201485222586124377Methylovorus sp. MP688 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_015138:1582458*1582458160012917672Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete4e-1177.8BLASTN svgBLASTP svg
NC_015138:20132320132322011418792Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete4e-1177.8BLASTN svgBLASTP svg
AP010958:3853082*3853082389809945018Escherichia coli O103:H2 str. 12009 DNA, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_006905:17264161726416175294526530Salmonella enterica subsp. enterica serovar Choleraesuis str7e-1073.8BLASTN svgBLASTP svg
NC_010102:13883441388344141572327380Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,7e-1073.8BLASTN svgBLASTP svg
NC_011080:17096121709612173614226531Salmonella enterica subsp. enterica serovar Newport str. SL254,7e-1073.8BLASTN svgBLASTP svg
NC_011083:17613521761352178789226541Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,7e-1073.8BLASTN svgBLASTP svg
NC_011149:1429523*1429523149808768565Salmonella enterica subsp. enterica serovar Agona str. SL483,7e-1073.8BLASTN svgBLASTP svg
NC_012880:2871480*2871480289700125522Dickeya dadantii Ech703, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_010002:39808323980832399913918308Delftia acidovorans SPH-1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013282:1804909*1804909182709922191Cronobacter turicensis, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014258:12750012750014912621627Pantoea vagans C9-1 plasmid pPag3, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_015563:35716823571682359959927918Delftia sp. Cs1-4 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015947:12906141290614131509924486Burkholderia sp. JV3 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008752:16687716687718811421238Acidovorax avenae subsp. citrulli AAC00-1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010676:26584952658495270919750703Burkholderia phytofirmans PsJN chromosome 2, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_012912:4194821*4194821421439319573Dickeya zeae Ech1591, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014118:987889987889104450356615Burkholderia sp. CCGE1002 chromosome chromosome 2, complete1e-0869.9BLASTN svgBLASTP svg
NC_014323:39763513976351403850962159Herbaspirillum seropedicae SmR1 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_020063:41704644170464419392123458Enterobacteriaceae bacterium strain FGI 57, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_004460:12371291237129126309925971Vibrio vulnificus CMCP6 chromosome II, complete sequence4e-0867.9BLASTN svgBLASTP svg
NC_014561:15314315314317999926857Pantoea vagans C9-1 plasmid pPag1, complete sequence4e-0867.9BLASTN svgBLASTP svg
NC_015061:3840463*3840463391463974177Rahnella sp. Y9602 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015563:4093650*4093650411960125952Delftia sp. Cs1-4 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_004757:427483*42748347957952097Nitrosomonas europaea ATCC 19718, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_005085:24623246234912724505Chromobacterium violaceum ATCC 12472, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012917:1923059*1923059194769524637Pectobacterium carotovorum subsp. carotovorum PC1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013411:28446128446131765133191Geobacillus sp. Y412MC61, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013956:44900004490000451370923710Pantoea ananatis LMG 20103 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014228:1712339*1712339175523642898Xenorhabdus nematophila ATCC 19061, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014915:24270002427000246118334184Geobacillus sp. Y412MC52 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014973:10715001071500110044928950Geobacter sp. M18 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015633:29195012919501294340723907Vibrio anguillarum 775 chromosome chromosome I, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_016010:1822212*1822212190411881907Xanthomonas axonopodis pv. citrumelo F1 chromosome, complete2e-0765.9BLASTN svgBLASTP svg
NC_006510:59133959133963985748519Geobacillus kaustophilus HTA426, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_005810:19760001976000199860722608Yersinia pestis biovar Microtus str. 91001, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_003198:13368941336894136036523472Salmonella enterica subsp. enterica serovar Typhi str. CT18,7e-0763.9BLASTN svgBLASTP svg
NC_003143:18800001880000190232522326Yersinia pestis CO92, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_002927:12925731292573131262720055Bordetella bronchiseptica RB50, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_006511:12731621273162129663123470Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC7e-0763.9BLASTN svgBLASTP svg
NC_008543:58212958212961104528917Burkholderia cenocepacia HI2424 chromosome 2, complete sequence7e-0763.9BLASTN svgBLASTP svg
NC_008700:27883632788363281549227130Shewanella amazonensis SB2B, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008752:415599*41559944209126493Acidovorax avenae subsp. citrulli AAC00-1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010002:33997703399770341841218643Delftia acidovorans SPH-1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010159:29555622955562297845722896Yersinia pestis Angola, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014500:3023762*3023762306170037939Dickeya dadantii 3937 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014664:3003633*3003633302609922467Rhodomicrobium vannielii ATCC 17100 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_012721:25561602556160260386447705Burkholderia glumae BGR1 chromosome 2, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011901:62571262571266531339602Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete3e-0661.9BLASTN svgBLASTP svg
NC_010688:38700038700041036023361Xanthomonas campestris pv. campestris, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008825:4025705*4025705405199926295Methylibium petroleiphilum PM1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008752:1523768*1523768154381320046Acidovorax avenae subsp. citrulli AAC00-1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012724:24435002443500246405820559Burkholderia glumae BGR1 chromosome 1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012997:81755381755384234124789Teredinibacter turnerae T7901, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014121:1848971*1848971187217723207Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete3e-0661.9BLASTN svgBLASTP svg
NC_014258:42262*422628159939338Pantoea vagans C9-1 plasmid pPag3, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_015222:948479484711662821782Nitrosomonas sp. AL212 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015410:96952696952699007820553Pseudomonas mendocina NK-01 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_018691:34378213437821346323225412Alcanivorax dieselolei B5 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007298:77872377872382009941377Dechloromonas aromatica RCB, complete genome3e-0661.9BLASTN svgBLASTP svg