Pre_GI Gene

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Host: NC_008543 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008543:2666846 Burkholderia cenocepacia HI2424 chromosome 2, complete sequence

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
26664092666849441hypothetical proteinBLASTP
266684626682521407major facilitator superfamily MFS_1QuickGO ontologyBLASTP
26683162668936621channel protein hemolysin III familyQuickGO ontologyBLASTP
266936326714412079carbon starvation protein CstAQuickGO ontologyBLASTP
267173226729911260transposase mutator typeQuickGO ontologyBLASTP
26733132673600288hypothetical proteinBLASTP
26742432674929687hypothetical proteinBLASTP
26750702675315246transcriptional regulator XRE familyQuickGO ontologyBLASTP
26753872675986600hypothetical proteinBLASTP
267602826777251698phage integrase family proteinQuickGO ontologyBLASTP
26783722679091720transcriptional regulator CrpFnr familyQuickGO ontologyBLASTP
26791912679619429PRC-barrel domain proteinQuickGO ontologyBLASTP
26804772680764288hypothetical proteinBLASTP
26809032681217315hypothetical proteinBLASTP
26815412682320780hypothetical proteinBLASTP
268239626844712076transketolaseQuickGO ontologyBLASTP
26844752684777303hypothetical protein
268528526865261242sodiumhydrogen exchangerQuickGO ontologyBLASTP
26866542686812159hypothetical protein
26872372687383147hypothetical protein
26879392688142204CsbD family proteinQuickGO ontologyBLASTP