Pre_GI: BLASTP Hits

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Query: NC_011205:645591:653125 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 653125, End: 653376, Length: 252

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013364:2612822:262232526223252622576252Escherichia coli O111:H- str. 11128, complete genomeputative transcriptional repressor9e-33138
NC_007946:2593500:260463426046342604882249Escherichia coli UTI89, complete genomeregulatory protein5e-29126
NC_016860:397138:404744404744404992249Salmonella enterica subsp. enterica serovar Typhimurium strregulatory protein1e-27121
NC_012125:1360593:136949613694961369744249Salmonella enterica subsp. enterica serovar Paratyphi C strainregulatory protein1e-27121
NC_011283:4170369:419074941907494191000252Klebsiella pneumoniae 342 chromosome, complete genomeregulatory protein Mnt6e-27119
NC_020418:3102460:311219731121973112451255Morganella morganii subsp. morganii KT, complete genomehypothetical protein1e-24111
NC_016902:1475521:148242214824221482682261Escherichia coli KO11FL chromosome, complete genomeputative transcriptional repressor protein1e-21101
CP002516:1475521:148242214824221482682261Escherichia coli KO11, complete genomeputative transcriptional repressor protein1e-21101
CP002185:2608000:262317526231752623435261Escherichia coli W, complete genomehypothetical protein1e-21101
NC_013361:3254000:326922532692253269491267Escherichia coli O26:H11 str. 11368 chromosome, complete genometranscriptional repressor protein9e-2199
NC_017328:335160:342100342100342393294Shigella flexneri 2002017 chromosome, complete genomeputative Chromosome segregation ATPase1e-2098.2
NC_011748:2655989:267090826709082671246339Escherichia coli 55989, complete genomeputative regulatory protein mnt (modular protein)2e-1787.8
CU928145:2655989:267090826709082671246339Escherichia coli 55989 chromosome, complete genomeputative regulatory protein mnt (modular protein)2e-1787.8
NC_011083:403022:410576410576410749174Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,Mnt2e-0858.2
NC_013008:1513000:151762915176291517883255Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein1e-0651.6
NC_002695:1571389:157641315764131576667255Escherichia coli O157:H7 str. Sakai, complete genomeputative regulatory protein1e-0651.6
NC_010322:3831444:383806338380633838221159Pseudomonas putida GB-1 chromosome, complete genomeArc domain-containing protein3e-0650.8
NC_010554:539122:559095559095559352258Proteus mirabilis HI4320, complete genomephage regulatory protein6e-0649.7