Pre_GI: BLASTP Hits

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Query: NC_010723:833870:841846 Clostridium botulinum E3 str. Alaska E43, complete genome

Start: 841846, End: 843150, Length: 1305

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain was probably isolated from salmon eggs associated with a foodborne case of botulism in Alaska, however the exact details are not available. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin.Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium. Honey is the most common vehicle for infection in infants. Food poisoning through C. botulinum is the most frequent type of infection caused by this bacterium. The wound botulism that occurs when C. botulinum infects an individual via an open wound is much rarer and is very similar to tetanus disease. There are several types of botulinum toxin known (type A through type F), all of them being neurotoxic polypeptides. The most common and widely distributed are strains and serovars of C. botulinum that produce type A toxin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010674:858397:8635498635498648321284Clostridium botulinum B str. Eklund 17B, complete genomeputative flagellar hook-length control protein2e-145516
NC_009617:4911595:4920721492072149220671347Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeflagellar hook-length control protein9e-42171
NC_020291:4903981:4931838493183849332261389Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeflagellar hook-length control protein FliK2e-40166
NC_014328:1135854:1137684113768411392251542Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative flagellar hook-length control protein3e-21103
NC_008593:1103293:1114865111486511162171353Clostridium novyi NT, complete genomeputative flagellar hook-length control protein1e-1998.2
NC_017297:2854934:2855785285578528571731389Clostridium botulinum F str. 230613 chromosome, complete genomeflagellar hook-length control protein1e-1895.1
NC_010520:2860960:2869230286923028706181389Clostridium botulinum A3 str. Loch Maree, complete genomeflagellar hook-length control protein1e-1894.7
NC_009698:2649453:2657722265772226591101389Clostridium botulinum A str. Hall chromosome, complete genomeflagellar hook-length control protein3e-1893.6
NC_009697:2714668:2720795272079527221831389Clostridium botulinum A str. ATCC 19397 chromosome, completeflagellar hook-length control protein3e-1893.6
NC_021182:2883716:2904234290423429067862553Clostridium pasteurianum BC1, complete genomeflagellar hook-length control protein2e-1584