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Query: NC_010610:107500 Lactobacillus fermentum IFO 3956, complete genome

Start: 107500, End: 134852, Length: 27353

Host Lineage: Lactobacillus fermentum; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. This probiotic species has been associated with active caries lesions.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010610:16495001649500167265923160Lactobacillus fermentum IFO 3956, complete genome02603BLASTN svgBLASTP svg
NC_010610:17650001765000179344828449Lactobacillus fermentum IFO 3956, complete genome02169BLASTN svgBLASTP svg
NC_010610:11784301178430122897750548Lactobacillus fermentum IFO 3956, complete genome02260BLASTN svgBLASTP svg
NC_010610:1580483*1580483162924448762Lactobacillus fermentum IFO 3956, complete genome02470BLASTN svgBLASTP svg
NC_010610:755000*75500078559930600Lactobacillus fermentum IFO 3956, complete genome02498BLASTN svgBLASTP svg
NC_010610:20136592013659205177738119Lactobacillus fermentum IFO 3956, complete genome02535BLASTN svgBLASTP svg
NC_010610:1385066*1385066141573130666Lactobacillus fermentum IFO 3956, complete genome02583BLASTN svgBLASTP svg
NC_010610:79597579597582885432880Lactobacillus fermentum IFO 3956, complete genome02595BLASTN svgBLASTP svg
NC_010610:269380*26938029559926220Lactobacillus fermentum IFO 3956, complete genome1e-91345BLASTN svgBLASTP svg
NC_010610:86119486119488392322730Lactobacillus fermentum IFO 3956, complete genome2e-69272BLASTN svgBLASTP svg
NC_007929:16372611637261165608018820Lactobacillus salivarius subsp. salivarius UCC118, complete genome5e-36161BLASTN svgBLASTP svg
NC_012984:10747211074721110359928879Lactobacillus plantarum JDM1, complete genome1e-33153BLASTN svgBLASTP svg
NC_004567:10667101066710108627219563Lactobacillus plantarum WCFS1, complete genome2e-19105BLASTN svgBLASTP svg
NC_013198:2088780*2088780211935230573Lactobacillus rhamnosus GG, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_013199:2058857*2058857209031631460Lactobacillus rhamnosus Lc 705, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_010999:21557142155714218202826315Lactobacillus casei, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_010610:90845290845293309924648Lactobacillus fermentum IFO 3956, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_008526:19735001973500199344619947Lactobacillus casei ATCC 334, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_013715:1750403*1750403177144221040Rothia mucilaginosa DY-18, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_013714:2086526*2086526215532168796Bifidobacterium dentium Bd1, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_018581:11809511180951122156540615Gordonia sp. KTR9 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014363:645397*64539768181236416Olsenella uli DSM 7084 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_005966:69689696899119521507Acinetobacter sp. ADP1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_011886:26966712696671271597719307Arthrobacter chlorophenolicus A6, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_018720:357716*35771638686729152Bifidobacterium asteroides PRL2011 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_010334:1783500*1783500181555632057Shewanella halifaxensis HAW-EB4, complete genome3e-0661.9BLASTN svgBLASTP svg