Pre_GI: BLASTP Hits

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Query: NC_009378:106193:114854 Yersinia pestis Pestoides F plasmid MT, complete sequence

Start: 114854, End: 115717, Length: 864

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Atypical strain isolated from the former Soviet Union, USSR. This strain lacks a plasminogen activator and is virulent by the aerosol route. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016846:24500:382223822239079858Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS2,replication initiation protein RepA5e-122437
NC_007607:87000:107005107005107862858Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceRepA2e-104379
NC_017319:192482:209331209331210188858Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceRepA7e-103373
NC_010660:175200:193116193116193973858Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequenceIncFII replication initiation protein RepA17e-103373
NC_004851:191709:209448209448210305858Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceRepA, replication protein7e-103373
NC_007608:97092:112308112308113165858Shigella boydii Sb227 plasmid pSB4_227, complete sequenceRepA7e-103373
NC_011749:34056:510235102351892870Escherichia coli UMN026 plasmid p1ESCUM, complete sequencereplication protein2e-99362
NC_009787:17344:290512905129908858Escherichia coli E24377A plasmid pETEC_35, complete sequencereplication initiation protein RepA3e-99361
NC_012752:1:11840840Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) plasmidplasmid replication initiator protein6e-0858.2