Pre_GI: BLASTP Hits

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Query: NC_008593:2457594:2471065 Clostridium novyi NT, complete genome

Start: 2471065, End: 2471140, Length: 76

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:2690448:27212532721253272132876Clostridium botulinum BKT015925 chromosome, complete genometRNA-Lys1e-0755.1
NC_015425:2690448:27039462703946270402176Clostridium botulinum BKT015925 chromosome, complete genometRNA-Lys1e-0755.1
NC_008593:2457594:24872682487268248734376Clostridium novyi NT, complete genometRNA-Lys1e-0755.1
NC_009495:38000:53322533225339776Clostridium botulinum A str. ATCC 3502 chromosome, complete genometRNA-Lys6e-0752.8
NC_009495:38000:60114601146018976Clostridium botulinum A str. ATCC 3502 chromosome, complete genometRNA-Lys6e-0752.8
NC_009697:38000:53337533375341276Clostridium botulinum A str. ATCC 19397 chromosome, completetRNA-Lys6e-0752.8
NC_009697:38000:59975599756005076Clostridium botulinum A str. ATCC 19397 chromosome, completetRNA-Lys6e-0752.8
NC_009698:38000:53337533375341276Clostridium botulinum A str. Hall chromosome, complete genometRNA-Lys6e-0752.8
NC_009698:38000:59976599766005176Clostridium botulinum A str. Hall chromosome, complete genometRNA-Lys6e-0752.8
NC_009699:33452:48609486094868476Clostridium botulinum F str. Langeland chromosome, complete genometRNA-Lys6e-0752.8
NC_009699:33452:55063550635513876Clostridium botulinum F str. Langeland chromosome, complete genometRNA-Lys6e-0752.8
NC_017297:33519:48678486784875376Clostridium botulinum F str. 230613 chromosome, complete genometRNA-Lys6e-0752.8
NC_017297:33519:55196551965527176Clostridium botulinum F str. 230613 chromosome, complete genometRNA-Lys6e-0752.8
NC_004557:1:52495249532476Clostridium tetani E88, complete genometRNA-Lys3e-0650.8