Pre_GI: BLASTP Hits

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Query: NC_008593:1103293:1119160 Clostridium novyi NT, complete genome

Start: 1119160, End: 1119351, Length: 192

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021182:2883716:290062629006262900820195Clostridium pasteurianum BC1, complete genomeuncharacterized protein, possibly involved in motility4e-1580.1
NC_010723:833870:847150847150847341192Clostridium botulinum E3 str. Alaska E43, complete genomehypothetical protein4e-1476.6
NC_010674:858397:868830868830869021192Clostridium botulinum B str. Eklund 17B, complete genomehypothetical protein1e-1375.1
NC_009617:4911595:491767249176724917863192Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeflagellar FlbD family protein2e-1374.7
NC_014328:1135854:114174111417411141935195Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative flagellar protein FlbD2e-1374.3
NC_020291:4903981:492857949285794928770192Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeflagellar protein FlbD9e-1372.4
NC_010520:2860960:286640728664072866616210Clostridium botulinum A3 str. Loch Maree, complete genomeflagellar protein FlbD2e-1168.2
NC_009698:2649453:265489926548992655108210Clostridium botulinum A str. Hall chromosome, complete genomeflagellar protein FlbD3e-1167
NC_009697:2714668:271797227179722718181210Clostridium botulinum A str. ATCC 19397 chromosome, completeflagellar protein FlbD3e-1167
NC_014652:628435:646213646213646440228Caldicellulosiruptor hydrothermalis 108 chromosome, completeflagellar flbd family protein8e-1062.4
NC_016751:1979201:198973619897361989939204Marinitoga piezophila KA3 chromosome, complete genomemotility protein5e-0959.7
NC_009633:2725128:272931327293132729510198Alkaliphilus metalliredigens QYMF chromosome, complete genomeflagellar FlbD family protein2e-0858.2
NC_018664:1663324:167519616751961675396201Clostridium acidurici 9a chromosome, complete genomeflagellar FlbD family protein4e-0857
NC_015391:2059191:208063320806332080836204Carnobacterium sp. 17-4 chromosome, complete genomeputative flagellar protein4e-0753.5
NC_015714:768500:786573786573786770198Treponema paraluiscuniculi Cuniculi A chromosome, complete genomeflagellar protein FlbD2e-0650.8
NC_000919:773784:791691791691791888198Treponema pallidum subsp. pallidum str. Nichols, complete genomeflagellar protein (flbD)2e-0650.8
NC_010741:775000:793139793139793336198Treponema pallidum subsp. pallidum SS14, complete genomeflagellar protein2e-0650.8
NC_016844:775334:793629793629793826198Treponema pallidum subsp. pallidum DAL-1 chromosome, completeflagellar protein FlbD2e-0650.8
NC_017268:775000:792941792941793138198Treponema pallidum subsp. pallidum str. Chicago chromosome,flagellar protein-like protein2e-0650.8
NC_021508:775264:793171793171793368198Treponema pallidum subsp. pallidum SS14, complete genomeflagellar protein FlbD2e-0650.8
NC_020134:586840:602818602818603096279Clostridium stercorarium subsp. stercorarium DSM 8532, completeflagellar FlbD family protein4e-0650.1
NC_019978:625476:640889640889641080192Halobacteroides halobius DSM 5150, complete genomeuncharacterized protein, possibly involved in motility6e-0649.7