Pre_GI: BLASTP Hits

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Query: NC_007606:3755155:3769333 Shigella dysenteriae Sd197, complete genome

Start: 3769333, End: 3771840, Length: 2508

Host Lineage: Shigella dysenteriae; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is an isolate from an epidemic in China in the 1950s. Causes bacillary dysentery. This genus is named for the Japanese scientist (Shiga) who first discovered these organisms in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. These organisms are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, causing over 160 million cases of infection and 1 million deaths yearly worldwide. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that can cause an active infection after a very low exposure. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. Shigella dysenteriae is the major cause of Shigella-related deaths in developing nations, mostly in young children.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004337:3590323:3746657374665737496292973Shigella flexneri 2a str. 301, complete genomehypothetical protein0835
NC_012967:3696877:3712991371299137178414851Escherichia coli B str. REL606 chromosome, complete genomeputative adhesin0820
NC_012947:126596:1265961265961314464851Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeYadA domain protein0820
CP002516:119935:1199351199351247854851Escherichia coli KO11, complete genomeYadA domain-containing protein0796
NC_009801:4073968:4091324409132440961744851Escherichia coli E24377A, complete genomeputative haemagglutinins/invasins protein0796
CP002185:3964500:3981288398128839861384851Escherichia coli W, complete genomeputative hemagglutinins/invasins protein0796
NC_011415:4006500:4023357402335740282074851Escherichia coli SE11 chromosome, complete genomeputative autotransporter0796
NC_016902:119935:1199351199351247854851Escherichia coli KO11FL chromosome, complete genomeYadA domain-containing protein0796
NC_011748:4131924:4150188415018841550384851Escherichia coli 55989, complete genomeconserved hypothetical protein; putative exported adhesin0796
CU928145:4131924:4150188415018841550384851Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein; putative exported adhesin0796
NC_010498:3988351:4013819401381940184684650Escherichia coli SMS-3-5, complete genomehaemagluttinin family protein0709
NC_009800:3787320:3804828380482838098525025Escherichia coli HS, complete genomeputative haemagglutinin0699
NC_010468:111504:1115041115041165285025Escherichia coli ATCC 8739, complete genome0699
NC_012846:199365:22361022361023597812369Bartonella grahamii as4aup, complete genomesurface protein/Bartonella adhesin1e-57224
NC_010515:1618093:16314151631415164257111157Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceYadA domain protein3e-54214
NC_005956:196976:2053782053782144889111Bartonella henselae str. Houston-1, complete genomeSurface protein/Bartonella adhesin1e-52208
NC_012846:199365:2067752067752129006126Bartonella grahamii as4aup, complete genomesurface protein/Bartonella adhesin3e-50201
NC_014932:1232346:1239917123991712424602544Bartonella clarridgeiae 73, complete genomeadhesin2e-49198
NC_012846:199365:2380072380072474839477Bartonella grahamii as4aup, complete genomesurface protein/Bartonella adhesin3e-45184
NC_020301:174467:18060618060619733616731Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomesurface protein/Bartonella adhesin3e-44180
NC_010161:205500:20807020807022317715108Bartonella tribocorum CIP 105476, complete genomeadhesin2e-43178
NC_012846:199365:2173712173712227285358Bartonella grahamii as4aup, complete genomesurface protein/Bartonella adhesin5e-43176
NC_005955:173436:1798601798601830573198Bartonella quintana str. Toulouse, complete genomeSurface protein/Bartonella adhesin3e-42174
NC_005955:173436:1866281866281895402913Bartonella quintana str. Toulouse, complete genomeSurface protein/Bartonella adhesin4e-42173
NC_005955:173436:1834181834181862672850Bartonella quintana str. Toulouse, complete genomeSurface protein/Bartonella adhesin2e-41171
NC_014932:1232346:1242600124260012454222823Bartonella clarridgeiae 73, complete genomehypothetical protein3e-34147
NC_012846:199365:1993651993652061746810Bartonella grahamii as4aup, complete genomesurface protein/Bartonella adhesin2e-31138
NC_014932:1232346:1245464124546412515446081Bartonella clarridgeiae 73, complete genomehypothetical protein3e-31137
NC_007509:971500:9809839809839865475565Burkholderia sp. 383 chromosome 3, complete sequenceYadA/Haemagluttinin like protein2e-30134
NC_015382:172213:1851321851321913236192Burkholderia gladioli BSR3 plasmid bgla_1p, complete sequenceYadA domain-containing protein2e-30134
NC_007606:3755155:3767585376758537687841200Shigella dysenteriae Sd197, complete genomehypothetical protein3e-30134
NC_007509:71954:7932279322833023981Burkholderia sp. 383 chromosome 3, complete sequenceHaemaglutinin/autotransporter like protein1e-29132
NC_004337:3590323:3744967374496737461151149Shigella flexneri 2a str. 301, complete genomehypothetical protein1e-29132
NC_014932:1232346:1252903125290312581555253Bartonella clarridgeiae 73, complete genomeBrpB1e-28129
NC_005956:196976:1969761969762021565181Bartonella henselae str. Houston-1, complete genomeSurface protein/Bartonella adhesin3e-27124
NC_013515:262025:2745262745262763281803Streptobacillus moniliformis DSM 12112, complete genomeYadA domain protein9e-27122
NC_015856:2488297:2517010251701025211464137Collimonas fungivorans Ter331 chromosome, complete genomehypothetical protein3e-25117
NC_020301:174467:1744671744671791704704Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomesurface protein/Bartonella adhesin3e-20101
NC_009076:2050621:2076401207640120799613561Burkholderia pseudomallei 1106a chromosome I, complete sequenceputative outer membrane protein6e-20100
NC_006350:1938631:1982643198264319874634821Burkholderia pseudomallei K96243 chromosome 1, complete sequencehypothetical protein1e-1999.4
NC_013515:183088:2154892154892191813693Streptobacillus moniliformis DSM 12112, complete genomeYadA domain protein1e-1999.4
NC_007434:2386036:2397108239710824020724965Burkholderia pseudomallei 1710b chromosome I, complete sequenceHep_Hag family protein/haemagluttinin motif family protein/YadA-like domain protein1e-1999
NC_008391:699222:7057837057837073931611Burkholderia cepacia AMMD chromosome 2, complete sequenceYadA C-terminal domain protein4e-1997.4
NC_013515:1623407:1633582163358216375834002Streptobacillus moniliformis DSM 12112, complete genomeYadA domain protein6e-1996.7
NC_013515:183088:2099952099952120702076Streptobacillus moniliformis DSM 12112, complete genomeYadA domain protein7e-1996.7
NC_015873:1557999:1563459156345915672383780Megasphaera elsdenii DSM 20460, complete genomeputative S-layer y domain protein1e-1895.9
NC_012913:56258:6298862988692906303Aggregatibacter aphrophilus NJ8700, complete genomeextracellular matrix protein adhesin A2e-1895.1
NC_013515:1623407:1638694163869416404121719Streptobacillus moniliformis DSM 12112, complete genomeYadA domain protein4e-1894
NC_009714:1329573:1340402134040213446194218Campylobacter hominis ATCC BAA-381, complete genomeputative large adhesin4e-1894
NC_015376:2061990:2074478207447820790434566Burkholderia gladioli BSR3 chromosome chromosome 2, completeputative membrane-anchored cell surface protein7e-1893.2
NC_007435:1914375:1943828194382819456811854Burkholderia pseudomallei 1710b chromosome II, complete sequenceHep_Hag family1e-1792.4
NC_015376:903939:9296989296989332313534Burkholderia gladioli BSR3 chromosome chromosome 2, completehemagglutinin2e-1791.7
NC_006351:101500:1052901052901072271938Burkholderia pseudomallei K96243 chromosome 2, complete sequencehypothetical protein4e-1790.9
NC_009714:727679:7354507354507400004551Campylobacter hominis ATCC BAA-381, complete genomeouter membrane protein4e-1790.9
NC_010515:1678487:1715055171505517182733219Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceYadA domain protein7e-1789.7
NC_015856:29338:4508245082468331752Collimonas fungivorans Ter331 chromosome, complete genomehypothetical protein7e-1789.7
NC_013515:1623407:1631515163151516333021788Streptobacillus moniliformis DSM 12112, complete genomeYadA domain protein2e-1688.6
NC_013520:91961:919619196110224410284Veillonella parvula DSM 2008, complete genomeHemagluttinin domain protein1e-1585.9
NC_013515:183088:1877721877721914103639Streptobacillus moniliformis DSM 12112, complete genomeYadA domain protein3e-1584.7
NC_020829:3050817:3051698305169830558524155Pseudomonas denitrificans ATCC 13867, complete genomesurface protein7e-1583.2
NC_015382:266000:1245612456159923537Burkholderia gladioli BSR3 plasmid bgla_1p, complete sequenceputative membrane-anchored cell surface protein1e-1482
NC_009714:1329573:1334692133469213404425751Campylobacter hominis ATCC BAA-381, complete genomeputative adhesin8e-1479.7
NC_013515:1623407:1640689164068916438863198Streptobacillus moniliformis DSM 12112, complete genomeYadA domain protein3e-1377.8
NC_010515:2111691:2111691211169121201358445Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceHaemagluttinin domain protein2e-1275.1
NC_010519:796229:80439580439581541911025Haemophilus somnus 2336 chromosome, complete genomeYadA domain-containing protein2e-1275.1
NC_013520:1905554:1905554190555419080522499Veillonella parvula DSM 2008, complete genomeS-layer domain protein3e-1274.3
NC_008061:190287:1902871902871984738187Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceHaemagluttinin motif protein5e-1273.9
NC_015856:4342500:4367510436751043689851476Collimonas fungivorans Ter331 chromosome, complete genomehemagluttinin motif protein1e-1172.8
NC_014752:324832:3283623283623298251464Neisseria lactamica ST-640, complete genomesurface exposed protein1e-1172.4
NC_014310:2017927:2017927201792720206832757Ralstonia solanacearum PSI07 megaplasmid, complete sequencesurface-exposed adhesin protein (fragment)2e-1171.6
NC_010519:445936:4505814505814604509870Haemophilus somnus 2336 chromosome, complete genomeYadA domain-containing protein3e-1171.2
NC_014752:1331447:13340871334087134527011184Neisseria lactamica ST-640, complete genomeadhesin4e-1170.9
NC_008309:385592:39411539411540683112717Haemophilus somnus 129PT, complete genomepossible large adhesin7e-1170.1
NC_010519:1165418:11692911169291118054011250Haemophilus somnus 2336 chromosome, complete genomeYadA domain-containing protein9e-1169.7
NC_008309:842072:84713084713085889211763Haemophilus somnus 129PT, complete genomepossible large adhesin1e-1068.9
NC_008309:1200245:12035001203500121471311214Haemophilus somnus 129PT, complete genomepossible large adhesin2e-1068.6
NC_005955:173436:190705190705191211507Bartonella quintana str. Toulouse, complete genomehypothetical protein2e-1068.6
NC_010519:1684901:1689542168954216960816540Haemophilus somnus 2336 chromosome, complete genomeYadA domain-containing protein3e-1068.2
NC_015382:266000:86748674110102337Burkholderia gladioli BSR3 plasmid bgla_1p, complete sequenceYadA domain-containing protein1e-0965.9
NC_008309:1827809:1832041183204118412779237Haemophilus somnus 129PT, complete genomepossible large adhesin2e-0965.5
NC_007606:3755155:377192937719293772765837Shigella dysenteriae Sd197, complete genomehypothetical protein3e-0964.7
NC_016043:1563505:1576250157625015788052556Taylorella asinigenitalis MCE3 chromosome, complete genomehypothetical protein3e-0964.3
NC_010519:71365:76675766758886612192Haemophilus somnus 2336 chromosome, complete genomeYadA domain-containing protein9e-0963.2
NC_014532:752807:7608027608027622321431Halomonas elongata DSM 2581, complete genomehaemagluttinin domain protein1e-0862.8
NC_010554:2789722:2811965281196528141902226Proteus mirabilis HI4320, complete genomeadhesin1e-0862.4
NC_010943:3069082:3090702309070230924621761Stenotrophomonas maltophilia K279a, complete genomeputative Hep Hag family adhesin2e-0862
NC_016043:1563505:1569042156904215760376996Taylorella asinigenitalis MCE3 chromosome, complete genomehypothetical protein3e-0861.2
NC_012721:182965:1959981959981973171320Burkholderia glumae BGR1 chromosome 2, complete genomeMembrane-anchored cell surface protein6e-0860.1
NC_010519:1802294:18069921806992181876311772Haemophilus somnus 2336 chromosome, complete genomeYadA domain-containing protein6e-0860.1
NC_013520:533803:5393045393045467707467Veillonella parvula DSM 2008, complete genomeYadA domain protein1e-0759.3
NC_010067:3538169:3550652355065235547644113Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-0758.9
NC_008309:190550:19700119700121243215432Haemophilus somnus 129PT, complete genomepossible large adhesin2e-0758.9
NC_014752:1363562:1376242137624213860219780Neisseria lactamica ST-640, complete genomeadhesin2e-0758.5
NC_016043:1563505:1579019157901915838964878Taylorella asinigenitalis MCE3 chromosome, complete genomehypothetical protein2e-0758.5
NC_013515:183088:2122792122792152752997Streptobacillus moniliformis DSM 12112, complete genomeYadA domain protein2e-0758.5
NC_013515:416760:4233284233284295496222Streptobacillus moniliformis DSM 12112, complete genomeYadA domain protein6e-0757
NC_013515:1623407:1644131164413116495725442Streptobacillus moniliformis DSM 12112, complete genomeYadA domain protein7e-0756.6
NC_008309:1851189:1858163185816318669078745Haemophilus somnus 129PT, complete genomepossible large adhesin9e-0756.6
NC_010519:1411347:14172521417252143122213971Haemophilus somnus 2336 chromosome, complete genomeYadA domain-containing protein9e-0756.6
NC_013515:262025:2680002680002742786279Streptobacillus moniliformis DSM 12112, complete genomeYadA domain protein1e-0656.2
NC_010519:1764261:1768676176867617758337158Haemophilus somnus 2336 chromosome, complete genomeYadA domain-containing protein1e-0655.8
NC_016043:1563505:1563505156350515665703066Taylorella asinigenitalis MCE3 chromosome, complete genomehypothetical protein2e-0655.5
NC_016077:1876119:1890260189026018956355376Acidaminococcus intestini RyC-MR95 chromosome, complete genomeS-layer protein4e-0654.3
NC_013515:183088:1988011988012050766276Streptobacillus moniliformis DSM 12112, complete genomeYadA domain protein7e-0653.5
NC_013515:183088:1921541921541983906237Streptobacillus moniliformis DSM 12112, complete genomeYadA domain protein7e-0653.1
NC_008309:1289370:12937551293755130441910665Haemophilus somnus 129PT, complete genomepossible large adhesin8e-0653.1
NC_015460:1687684:16912041691204170484113638Gallibacterium anatis UMN179 chromosome, complete genomeputative hemagglutinin8e-0653.1
NC_016077:1944000:1953550195355019562192670Acidaminococcus intestini RyC-MR95 chromosome, complete genomeS-layer protein9e-0653.1