Pre_GI: BLASTP Hits

Some Help

Query: NC_007604:1586243:1601489 Synechococcus elongatus PCC 7942, complete genome

Start: 1601489, End: 1602886, Length: 1398

Host Lineage: Synechococcus elongatus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: This strain is a freshwater organism and is extensively studied due to its circadian clock which controls the expression of upwards of 800 genes during a 24 hour period. These unicellular cyanobacteria are also known as blue green algae and along with Prochlorococcus are responsible for a large part of the carbon fixation that occurs in marine environments. Synechococcus have a broader distribution in the ocean and are less abundant in oligotrophic (low nutrient) regions. These organism utilize photosystem I and II to capture light energy. They are highly adapted to marine environments and some strains have evolved unique motility systems in order to propel themselves towards areas that contain nitrogenous compounds. An obligate photoautotroph, it has been studied extensively by an international research community with respect to acquisition of organic carbon, transport and regulation of nitrogen compounds, adaptation to nutrient stresses, and reponse to light intensity.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006576:2683467:2459245938561398Synechococcus elongatus PCC 6301, complete genomeputative ribonuclease II0914
NC_011884:2551715:2551715255171525535621848Cyanothece sp. PCC 7425, complete genomeribonuclease II2e-23110
NC_020389:571466:5714665714665732651800Methanosarcina mazei Tuc01, complete genomeExoribonuclease II2e-1790.5
NC_007604:1586243:160065216006521600777126Synechococcus elongatus PCC 7942, complete genomeputative ribonuclease II2e-1273.9
NC_013642:505518:5186435186435207752133Thermotoga naphthophila RKU-10, complete genomeribonuclease R4e-1273.2
NC_015966:2875140:2888019288801928899981980Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeExoribonuclease II6e-1272.4
NC_009053:1668500:1692326169232616946832358Actinobacillus pleuropneumoniae L20, complete genomeribonuclease R9e-1272
NC_007350:1971762:1973249197324919756392391Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,exoribonuclease9e-1272
NC_012968:1108687:1132872113287211353792508Methylotenera mobilis JLW8, complete genomeribonuclease R8e-1272
NC_010278:1625695:1653374165337416557312358Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,ribonuclease R1e-1171.2
NC_011978:1812000:1818095181809518202272133Thermotoga neapolitana DSM 4359, complete genomeRibonuclease R2e-1171.2
NC_012214:594667:5946675946675971082442Erwinia pyrifoliae Ep1/96, complete genomeRibonuclease R2e-1170.9
NC_007481:3167434:3167434316743431696832250Pseudoalteromonas haloplanktis TAC125 chromosome I, completecold-shock RNAse R3e-1170.5
NC_015930:821342:8357518357518377512001Lactococcus garvieae ATCC 49156, complete genomeexoribonuclease4e-1170.1
NC_012997:541648:5601225601225627042583Teredinibacter turnerae T7901, complete genomeribonuclease R7e-1168.9
NC_010939:1633000:1656085165608516584422358Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeribonuclease R1e-1068.6
NC_011999:558057:5605385605385628592322Macrococcus caseolyticus JCSC5402, complete genomeVacB/RNase II family exoribonuclease1e-1068.2
NC_002745:840848:8408488408488432202373Staphylococcus aureus subsp. aureus N315, complete genomeribonuclease R2e-1067.8
NC_009487:866000:8826728826728850442373Staphylococcus aureus subsp. aureus JH9 chromosome, completeribonuclease R2e-1067.8
NC_017342:2486000:2505106250510625074782373Staphylococcus aureus subsp. aureus TCH60 chromosome, completeribonuclease R1e-1067.8
NC_017353:2129738:2131550213155021339252376Staphylococcus lugdunensis N920143, complete genomeputative ribonuclease R2e-1067.4
NC_016941:807155:8243308243308267022373Staphylococcus aureus subsp. aureus MSHR1132, complete genomeputative ribonuclease R2e-1067.4
NC_017506:3717261:3741721374172137437061986Marinobacter adhaerens HP15 chromosome, complete genomeexoribonuclease R3e-1067
NC_008150:4373722:4394584439458443971182535Yersinia pestis Antiqua, complete genomeribonuclease R4e-1066.6
NC_017168:687471:7083337083337108672535Yersinia pestis A1122 chromosome, complete genomeexoribonuclease R4e-1066.6
NC_017337:853221:8532218532218555932373Staphylococcus aureus subsp. aureus ED133 chromosome, completeribonuclease R3e-1066.6
NC_012522:98567:1200181200181218921875Rhodococcus opacus B4, complete genomeputative ribonuclease3e-0963.5
NC_020063:2480983:2500855250085525027891935Enterobacteriaceae bacterium strain FGI 57, complete genomeexoribonuclease II9e-0962
NC_010674:3141228:3151182315118231534222241Clostridium botulinum B str. Eklund 17B, complete genomeribonuclease R1e-0861.6
NC_005071:786000:8074968074968095622067Prochlorococcus marinus str. MIT 9313, complete genomeprobable ribonuclease II3e-0860.5
NC_011567:2468708:2468708246870824709842277Anoxybacillus flavithermus WK1, complete genomeExoribonuclease R6e-0859.3
NC_013406:303218:3080613080613106912631Paenibacillus sp. Y412MC10 chromosome, complete genomeribonuclease R2e-0757.8
NC_016593:3116145:3132693313269331349692277Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeribonuclease R2e-0757.4
NC_011658:4866184:4866184486618448686042421Bacillus cereus AH187 chromosome, complete genomeribonuclease R2e-0757.4
NC_012472:4867210:4867210486721048696482439Bacillus cereus 03BB102, complete genomeribonuclease R3e-0757
NC_017200:4915780:4915780491578049182062427Bacillus thuringiensis serovar finitimus YBT-020 chromosome,ribonuclease R3e-0757
NC_011772:4994500:4996953499695349993912439Bacillus cereus G9842, complete genomeribonuclease R4e-0756.6
NC_006274:4910465:4910465491046549128972433Bacillus cereus E33L, complete genomeribonuclease R (RNase R)4e-0756.6
NC_014335:4800500:4803111480311148055312421Bacillus cereus biovar anthracis str. CI chromosome, completeribonuclease R4e-0756.6
NC_004722:5027762:5031501503150150339272427Bacillus cereus ATCC 14579, complete genomeExoribonuclease II4e-0756.6
NC_011725:5043198:5043198504319850456242427Bacillus cereus B4264 chromosome, complete genomeribonuclease R4e-0756.6
NC_005957:4850659:4857959485795948603732415Bacillus thuringiensis serovar konkukian str. 97-27, completeribonuclease R (RNase R)4e-0756.6
NC_011773:4914601:4914601491460149170212421Bacillus cereus AH820 chromosome, complete genomeribonuclease R4e-0756.6
NC_014829:3741843:3757484375748437598622379Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeribonuclease R4e-0756.2
NC_017208:5096759:5096759509675950992032445Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeexoribonuclease II5e-0756.2
NC_006576:456569:4775044775044795162013Synechococcus elongatus PCC 6301, complete genomeribonuclease II5e-0756.2
NC_010184:4879552:4884254488425448866982445Bacillus weihenstephanensis KBAB4, complete genomeribonuclease R1e-0655.1
NC_014624:2668157:2695671269567126978242154Eubacterium limosum KIST612 chromosome, complete genomeribonuclease R4e-0653.1
NC_009674:3732000:3732119373211937344972379Bacillus cytotoxicus NVH 391-98 chromosome, complete genomeribonuclease R5e-0652.8