Pre_GI: BLASTP Hits

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Query: NC_007482:607365:607365 Pseudoalteromonas haloplanktis TAC125 chromosome II, complete

Start: 607365, End: 608435, Length: 1071

Host Lineage: Pseudoalteromonas haloplanktis; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a sample of coastal sea water near a French Antarctic station. This organism is adapted to growth at low temperatures and reactive oxygen species by a number of putative dioxygenases and fatty acid desaturases amongst other proteins. The organism can grow optimally in salt concentrations of 1.5 to 3.5% NaCl.The genome consists of 2 chromosomes, one of which may replicate unidirectionally. Some interesting features of this genome include the lack of the nucleoid-associated gene hns, a lack of genes involved in molybdopterin metabolism, a lack of the cAMP-CAP complex, and a lack of the PEP-dependent PTS system.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015186:2165628:2167151216715121682211071Acidiphilium multivorum AIU301, complete genomeornithine cyclodeaminase7e-112404
NC_003065:27163:5838358383594981116Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequenceornithine cyclodeaminase2e-109395
NC_003308:1:2498024980260951116Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequenceornithine cyclodeaminase2e-109395
NC_019973:5716453:5736794573679457378671074Mesorhizobium australicum WSM2073, complete genomeputative ornithine cyclodeaminase, mu-crystallin4e-108391
NC_015675:6342164:6362505636250563635781074Mesorhizobium opportunistum WSM2075 chromosome, complete genomeOrnithine cyclodeaminase4e-108391
NC_014923:5787493:5807834580783458089071074Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeOrnithine cyclodeaminase4e-108391
NC_014034:2253649:2271812227181222728641053Rhodobacter capsulatus SB1003 chromosome, complete genomeornithine cyclodeaminase-13e-102372
NC_007948:4558000:4569675456967545707331059Polaromonas sp. JS666, complete genomeOrnithine cyclodeaminase2e-95349
NC_015733:2720183:2726967272696727280191053Pseudomonas putida S16 chromosome, complete genomeornithine cyclodeaminase3e-95348
NC_015379:3570658:3581989358198935830441056Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,ornithine cyclodeaminase4e-93341
NC_003296:556836:6038426038426048911050Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completeornithine cyclodeaminase2e-91335
NC_010336:1335558:1338148133814813391641017Francisella philomiragia subsp. philomiragia ATCC 25017, completeOrnithine cyclodeaminase3e-82305
NC_008601:1518136:1532670153267015336861017Francisella tularensis subsp. novicida U112, complete genomeornithine cyclodeaminase7e-82304
NC_009257:386283:386283386283387218936Francisella tularensis subsp. tularensis WY96-3418 chromosome,ornithine cyclodeaminase9e-74277
NC_009749:558171:558171558171559031861Francisella tularensis subsp. holarctica FTA, complete genomeornithine cyclodeaminase8e-64244
NC_007880:556334:556334556334557182849Francisella tularensis subsp. holarctica, complete genomeornithine cyclodeaminase5e-62238
NC_015320:790137:8061088061088071151008Archaeoglobus veneficus SNP6 chromosome, complete genomealanine dehydrogenase2e-28127
NC_013526:911909:940597940597941505909Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeOrnithine cyclodeaminase1e-25117
NC_020126:5470090:5475502547550254766021101Myxococcus stipitatus DSM 14675, complete genomeornithine cyclodeaminase9e-24111
NC_009464:1397739:140147014014701402441972Uncultured methanogenic archaeon RC-I, complete genomeornithine cyclodeaminase1e-22107
NC_013173:1231213:125346112534611254420960Desulfomicrobium baculatum DSM 4028, complete genomeOrnithine cyclodeaminase6e-21102
NC_014507:2568933:258515825851582586093936Methanoplanus petrolearius DSM 11571 chromosome, complete genomeornithine cyclodeaminase4e-1995.9
NC_004461:277291:316851316851317801951Staphylococcus epidermidis ATCC 12228, complete genomeornithine cyclodeaminase2e-1893.6
NC_007929:1290568:131007413100741311060987Lactobacillus salivarius subsp. salivarius UCC118, complete genomeOrnithine cyclodeaminase1e-1790.9
NC_003305:1035342:105174610517461052690945Agrobacterium tumefaciens str. C58 chromosome linear, completeornithine cyclodeaminase3e-1686.3
NC_003063:1019674:102206610220661023052987Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein3e-1686.3
NC_019962:1750497:180660218066021807591990Natrinema pellirubrum DSM 15624, complete genomeputative ornithine cyclodeaminase, mu-crystallin1e-1584.3
NC_009328:2378345:2387462238746223884661005Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeectoine utilization protein EutC7e-1581.6
NC_015151:1872280:188119418811941882159966Vulcanisaeta moutnovskia 768-28 chromosome, complete genomeornithine cyclodeaminase2e-1480.5
NC_007908:1010162:102502710250271025998972Rhodoferax ferrireducens T118, complete genomeOrnithine cyclodeaminase3e-1480.1
NC_013744:300000:312490312490313479990Haloterrigena turkmenica DSM 5511 plasmid pHTUR01, completeOrnithine cyclodeaminase3e-1479.7
NC_009380:1177316:118035711803571181346990Salinispora tropica CNB-440 chromosome, complete genomeornithine cyclodeaminase2e-1376.6
NC_013093:2895511:289650028965002897438939Actinosynnema mirum DSM 43827, complete genomeOrnithine cyclodeaminase3e-1376.6
NC_008786:2425314:244290624429062443889984Verminephrobacter eiseniae EF01-2, complete genomeOrnithine cyclodeaminase2e-1273.9
NC_018000:1852691:186701018670101867891882Sinorhizobium fredii USDA 257 chromosome, complete genomeornithine cyclodeaminase 27e-1272
NC_007168:2448422:245152424515242452483960Staphylococcus haemolyticus JCSC1435, complete genomeornithine cyclodeaminase1e-1170.9
NC_013202:906044:935148935148936140993Halomicrobium mukohataei DSM 12286, complete genomeOrnithine cyclodeaminase2e-1170.5
NC_002947:4994335:502668950266895027681993Pseudomonas putida KT2440, complete genomeornithine cyclodeaminase2e-1170.1
NC_016943:3270308:328337132833713284318948Blastococcus saxobsidens DD2, complete genomeornithine cyclodeaminase/mu-crystallin3e-1169.7
NC_011985:61003:654806548066430951Agrobacterium radiobacter K84 chromosome 1, complete genomeornithine cyclodeaminase protein4e-1169.3
NC_015138:201323:202271202271203254984Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeOrnithine cyclodeaminase4e-1169.3
NC_012587:3613162:361933436193343620281948Rhizobium sp. NGR234, complete genomeornithine cyclodeaminase/mu-crystallin family protein5e-1168.9
NC_020164:2219612:221961222196122220559948Staphylococcus warneri SG1, complete genomeornithine cyclodeaminase7e-1168.6
NC_009832:3313058:332765333276533328609957Serratia proteamaculans 568, complete genomeOrnithine cyclodeaminase7e-1168.6
NC_014334:369974:377906377906378901996Lactobacillus casei str. Zhang chromosome, complete genomeputative ornithine cyclodeaminase2e-1067
NC_010999:349252:354632354632355627996Lactobacillus casei, complete genomeOrnithine cyclodeaminase/mu-crystallin:Shikimate/quinate 5-dehydrogenase2e-1067
NC_016629:2784000:278836227883622789264903Desulfovibrio africanus str. Walvis Bay chromosome, completeornithine cyclodeaminase/mu-crystallin3e-1066.6
NC_015957:7348269:738051373805137381427915Streptomyces violaceusniger Tu 4113 chromosome, complete genomeornithine cyclodeaminase/mu-crystallin3e-1066.6
NC_008752:166877:165897165897166880984Acidovorax avenae subsp. citrulli AAC00-1, complete genomeOrnithine cyclodeaminase3e-0963.2
NC_010994:57362:611626116262109948Rhizobium etli CIAT 652, complete genomeornithine cyclodeaminase protein4e-0962.8
NC_011894:4066926:407412040741204075085966Methylobacterium nodulans ORS 2060, complete genomeornithine cyclodeaminase/mu-crystallin7e-0962
NC_015727:1294532:132413713241371325135999Cupriavidus necator N-1 plasmid BB1p, complete sequenceornithine cyclodeaminase Ocd6e-0858.9
NC_013194:761166:778243778243779202960Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeOrnithine cyclodeaminase2e-0757.4
NC_013947:6678000:669618966961896697094906Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeornithine cyclodeaminase/mu-crystallin4e-0755.8
NC_012850:4422966:442742644274264428373948Rhizobium leguminosarum bv. trifolii WSM1325, complete genomeOrnithine cyclodeaminase9e-0754.7
NC_008380:58232:620456204562992948Rhizobium leguminosarum bv. viciae 3841, complete genomeOrnithine cyclodeaminase (OCD).2e-0653.5
NC_014761:1321187:132335113233511324247897Oceanithermus profundus DSM 14977 chromosome, complete genomeornithine cyclodeaminase4e-0652.8
NC_015856:633353:650341650341651258918Collimonas fungivorans Ter331 chromosome, complete genomeornithine cyclodeaminase5e-0652.4