Pre_GI: BLASTP Hits

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Query: NC_005140:1820970:1822551 Vibrio vulnificus YJ016 chromosome II, complete sequence

Start: 1822551, End: 1823654, Length: 1104

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004460:1237129:1238735123873512397931059Vibrio vulnificus CMCP6 chromosome II, complete sequenceOuter membrane protein0707
NC_005139:2201820:2269491226949122705161026Vibrio vulnificus YJ016 chromosome I, complete sequenceputative outer membrane protein3e-1479.7
NC_020064:1409596:1409596140959614106931098Serratia marcescens FGI94, complete genomeouter membrane protein (porin)2e-0860.5
NC_021066:601029:6145096145096155791071Raoultella ornithinolytica B6, complete genomeouter membrane protein F3e-0859.7
NC_011283:1901229:1915691191569119168361146Klebsiella pneumoniae 342 chromosome, complete genomeporin4e-0859.3
NC_014618:3700640:3715169371516937162661098Enterobacter cloacae SCF1 chromosome, complete genomeporin7e-0858.5
CU928160:2091249:2095731209573120969481218Escherichia coli IAI1 chromosome, complete genomePorin OmpN2e-0757
NC_011741:2091249:2095731209573120969481218Escherichia coli IAI1 chromosome, complete genomePorin OmpN2e-0757
NC_013941:2425233:2428383242838324295701188Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein4e-0756.2
NC_016902:1902431:1919201191920119203161116Escherichia coli KO11FL chromosome, complete genomeporin5e-0755.8
CP002185:2181936:2185539218553921866541116Escherichia coli W, complete genome5e-0755.8
CP002516:1902431:1919201191920119203161116Escherichia coli KO11, complete genomeporin Gram-negative type5e-0755.8
NC_011740:1991941:1995018199501819960731056Escherichia fergusonii ATCC 35469, complete genomeOuter membrane protein N precursor (porin)8e-0755.1
NC_008563:2041345:2041345204134520424901146Escherichia coli APEC O1, complete genomeOuter membrane protein N precursor1e-0654.3
AP010958:2272919:2273321227332122743941074Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted outer membrane porin protein3e-0653.1
NC_009801:2159123:2163636216363621647091074Escherichia coli E24377A, complete genomeouter membrane protein homolog3e-0653.1
NC_013353:2272919:2273321227332122743941074Escherichia coli O103:H2 str. 12009, complete genomeouter membrane porin protein3e-0653.1
NC_013008:2561586:256518825651882565832645Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeouter membrane protein4e-0652.8
NC_011353:2563056:256620725662072566851645Escherichia coli O157:H7 str. EC4115 chromosome, complete genome4e-0652.8
NC_002695:2655445:265859626585962659240645Escherichia coli O157:H7 str. Sakai, complete genomeputative outer membrane protein4e-0652.8
NC_013716:357928:3596823596823607341053Citrobacter rodentium ICC168, complete genomeouter membrane pore protein E4e-0652.8
NC_002655:2730659:273378027337802734454675Escherichia coli O157:H7 EDL933, complete genomeputative outer membrane protein5e-0652.8
NC_014500:2934232:2943874294387429449801107Dickeya dadantii 3937 chromosome, complete genomeouter membrane protein F5e-0652.4
NC_011740:1991941:1996644199664419977471104Escherichia fergusonii ATCC 35469, complete genomeouter membrane porin; DLP12 prophage5e-0652.4
NC_014121:1101093:1103964110396411050161053Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeouter membrane phosphoporin protein E5e-0652.4
NC_008253:1938975:1938975193897519400331059Escherichia coli 536, complete genomeputative outer membrane pore protein6e-0652
NC_016514:2476359:2480816248081624819251110Enterobacter cloacae EcWSU1 chromosome, complete genomeouter membrane protein N7e-0652
NC_004431:2185750:2185750218575021868771128Escherichia coli CFT073, complete genomeOuter membrane protein N precursor9e-0651.6