Pre_GI: BLASTP Hits

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Query: NC_005126:3812054:3835336 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 3835336, End: 3835593, Length: 258

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012962:3568046:358257535825753582832258Photorhabdus asymbiotica, complete genomehypothetical protein1e-37155
NC_007511:3371319:337944733794473379713267Burkholderia sp. 383 chromosome 2, complete sequencehypothetical protein2e-1580.9
NC_007952:495000:508125508125508388264Burkholderia xenovorans LB400 chromosome 2, complete sequencehypothetical protein7e-1372.8
NC_007347:1:234672346723727261Ralstonia eutropha JMP134 chromosome 1, complete sequencePAAR4e-1270.1
NC_017060:125480:138629138629138892264Rahnella aquatilis HX2 plasmid PRA1, complete sequencehypothetical protein3e-1167
NC_015062:130359:141799141799142062264Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequencehypothetical protein3e-1167
NC_013971:3117000:312800031280003128263264Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein5e-1166.2
NC_010067:2529750:254301525430152543278264Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein9e-1165.5
NC_010501:3575726:358475335847533585016264Pseudomonas putida W619, complete genomePAAR repeat-containing protein6e-1062.8
NC_012856:1585989:159821515982151598499285Ralstonia pickettii 12D chromosome 1, complete genomePAAR repeat-containing protein6e-1062.8
NC_014733:1223359:124555012455501246419870Methylovorus sp. MP688 chromosome, complete genomepaar repeat-containing protein1e-0962
NC_010501:3575726:358865735886573588917261Pseudomonas putida W619, complete genomePAAR repeat-containing protein1e-0961.6
NC_013282:2026083:204892020489202049183264Cronobacter turicensis, complete genomehypothetical protein3e-0960.5
NC_008027:558507:575865575865576128264Pseudomonas entomophila L48, complete genomehypothetical protein4e-0960.1
NC_014323:816027:838891838891839148258Herbaspirillum seropedicae SmR1 chromosome, complete genomehypothetical protein4e-0960.1
NC_012721:710887:722617722617722877261Burkholderia glumae BGR1 chromosome 2, complete genomePAAR5e-0959.7
NC_017168:144000:151853151853152158306Yersinia pestis A1122 chromosome, complete genomehypothetical protein8e-0959.3
NC_009381:720000:727830727830728135306Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein8e-0959.3
NC_005810:4045303:405809040580904058395306Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein8e-0959.3
NC_013961:629307:643107643107643301195Erwinia amylovora, complete genomehypothetical protein1e-0858.2
NC_012721:240000:255623255623255880258Burkholderia glumae BGR1 chromosome 2, complete genomePAAR repeat-containing protein2e-0857.4
NC_011000:2732330:273902427390242739275252Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein3e-0857
NC_003295:3421520:347780734778073478079273Ralstonia solanacearum GMI1000, complete genomehypothetical protein4e-0856.6
NC_007650:84140:104401104401104664264Burkholderia thailandensis E264 chromosome II, complete sequencePAAR motif family5e-0856.6
NC_007651:3656433:367803936780393678302264Burkholderia thailandensis E264 chromosome I, complete sequencePAAR motif family5e-0856.6
NC_007435:305937:305937305937306200264Burkholderia pseudomallei 1710b chromosome II, complete sequencePAAR motif family8e-0855.8
NC_010551:1412139:142465314246531424904252Burkholderia ambifaria MC40-6 chromosome 1, complete sequencePAAR repeat-containing protein1e-0755.1
NC_008390:2448379:246028124602812460532252Burkholderia cepacia AMMD chromosome 1, complete sequencePAAR repeat-containing protein1e-0755.1
NC_009075:92210:114950114950115213264Burkholderia pseudomallei 668 chromosome II, complete sequencepaar motif family1e-0755.1
NC_009078:74954:950689506895331264Burkholderia pseudomallei 1106a chromosome II, complete sequencepaar motif family1e-0755.1
NC_006351:73000:956249562495887264Burkholderia pseudomallei K96243 chromosome 2, complete sequencehypothetical protein1e-0755.1
NC_006351:1631760:163176016317601632023264Burkholderia pseudomallei K96243 chromosome 2, complete sequencehypothetical protein1e-0755.1
NC_009078:1578500:157867515786751578938264Burkholderia pseudomallei 1106a chromosome II, complete sequencePAAR motif family protein1e-0755.1
NC_009075:1638789:164416516441651644428264Burkholderia pseudomallei 668 chromosome II, complete sequencepaar motif family1e-0755.1
NC_007435:1914375:193414619341461934409264Burkholderia pseudomallei 1710b chromosome II, complete sequencePAAR motif family1e-0755.1
NC_011000:1262324:127654512765451276796252Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein2e-0754.3
NC_010557:1030319:104723310472331047484252Burkholderia ambifaria MC40-6 chromosome 3, complete sequencePAAR repeat-containing protein3e-0753.9
NC_009256:1282793:129863812986381298889252Burkholderia vietnamiensis G4 chromosome 1, complete sequencePAAR repeat-containing protein4e-0753.5
NC_012962:4427000:444148144414814441753273Photorhabdus asymbiotica, complete genomehypothetical protein4e-0753.5
NC_009256:2509806:252862125286212528872252Burkholderia vietnamiensis G4 chromosome 1, complete sequencePAAR repeat-containing protein5e-0753.1
NC_014323:992978:103409510340951034361267Herbaspirillum seropedicae SmR1 chromosome, complete genomehypothetical protein5e-0753.1
NC_010557:1030319:104828910482891048540252Burkholderia ambifaria MC40-6 chromosome 3, complete sequencePAAR repeat-containing protein5e-0753.1
NC_011000:2514897:252119925211992521462264Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein5e-0753.1
NC_011000:2514897:251954525195452519808264Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein5e-0753.1
NC_012721:1395417:140494314049431405194252Burkholderia glumae BGR1 chromosome 2, complete genomePAAR9e-0752.4
NC_003295:998000:101061510106151010881267Ralstonia solanacearum GMI1000, complete genomehypothetical protein1e-0652
NC_016612:5600177:560787956078795608145267Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein2e-0650.8
NC_012725:97681:110044110044110295252Burkholderia glumae BGR1 plasmid bglu_4p, complete sequencePAAR repeat-containing protein3e-0650.4
NC_010681:1:157651576516016252Burkholderia phytofirmans PsJN chromosome 1, complete sequencePAAR repeat-containing protein3e-0650.4
NC_014323:27327:407654076541031267Herbaspirillum seropedicae SmR1 chromosome, complete genomehypothetical protein4e-0650.1
NC_016626:400080:421405421405421656252Burkholderia sp. YI23 plasmid byi_1p, complete sequencePAAR motif-containing protein5e-0649.7